Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26004 | 78235;78236;78237 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
N2AB | 24363 | 73312;73313;73314 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
N2A | 23436 | 70531;70532;70533 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
N2B | 16939 | 51040;51041;51042 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
Novex-1 | 17064 | 51415;51416;51417 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
Novex-2 | 17131 | 51616;51617;51618 | chr2:178568122;178568121;178568120 | chr2:179432849;179432848;179432847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs770885887 | -0.106 | 0.999 | N | 0.589 | 0.27 | 0.327419511103 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/E | rs770885887 | -0.106 | 0.999 | N | 0.589 | 0.27 | 0.327419511103 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5604 | ambiguous | 0.5637 | ambiguous | -0.282 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
K/C | 0.7849 | likely_pathogenic | 0.7349 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/D | 0.8841 | likely_pathogenic | 0.8972 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/E | 0.4519 | ambiguous | 0.5 | ambiguous | -0.516 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.462224071 | None | None | N |
K/F | 0.9441 | likely_pathogenic | 0.9496 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/G | 0.5967 | likely_pathogenic | 0.6026 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/H | 0.4865 | ambiguous | 0.4706 | ambiguous | -1.077 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/I | 0.7731 | likely_pathogenic | 0.8025 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.511629446 | None | None | N |
K/L | 0.7298 | likely_pathogenic | 0.7462 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/M | 0.5608 | ambiguous | 0.571 | pathogenic | 0.497 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
K/N | 0.7505 | likely_pathogenic | 0.7604 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.507589804 | None | None | N |
K/P | 0.8887 | likely_pathogenic | 0.9141 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/Q | 0.2558 | likely_benign | 0.2581 | benign | -0.482 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.47967367 | None | None | N |
K/R | 0.0739 | likely_benign | 0.0702 | benign | -0.195 | Destabilizing | 0.999 | D | 0.533 | neutral | N | 0.482424788 | None | None | N |
K/S | 0.6459 | likely_pathogenic | 0.6408 | pathogenic | -0.653 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/T | 0.4975 | ambiguous | 0.5463 | ambiguous | -0.485 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.472379062 | None | None | N |
K/V | 0.6966 | likely_pathogenic | 0.721 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/W | 0.9097 | likely_pathogenic | 0.9093 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.8672 | likely_pathogenic | 0.8691 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.