Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26009 | 78250;78251;78252 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
N2AB | 24368 | 73327;73328;73329 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
N2A | 23441 | 70546;70547;70548 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
N2B | 16944 | 51055;51056;51057 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
Novex-1 | 17069 | 51430;51431;51432 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
Novex-2 | 17136 | 51631;51632;51633 | chr2:178568107;178568106;178568105 | chr2:179432834;179432833;179432832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs951099049 | None | 0.002 | N | 0.335 | 0.126 | 0.143124449307 | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02627E-05 |
I/T | rs1328584440 | -2.59 | 0.012 | N | 0.557 | 0.362 | 0.648717662934 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/T | rs1328584440 | -2.59 | 0.012 | N | 0.557 | 0.362 | 0.648717662934 | gnomAD-4.0.0 | 4.10606E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39749E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.901 | likely_pathogenic | 0.9339 | pathogenic | -2.979 | Highly Destabilizing | 0.007 | N | 0.544 | neutral | None | None | None | None | N |
I/C | 0.8909 | likely_pathogenic | 0.9125 | pathogenic | -1.771 | Destabilizing | 0.356 | N | 0.729 | prob.delet. | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9993 | pathogenic | -3.48 | Highly Destabilizing | 0.136 | N | 0.781 | deleterious | None | None | None | None | N |
I/E | 0.9957 | likely_pathogenic | 0.9972 | pathogenic | -3.167 | Highly Destabilizing | 0.136 | N | 0.746 | deleterious | None | None | None | None | N |
I/F | 0.4691 | ambiguous | 0.4895 | ambiguous | -1.756 | Destabilizing | 0.072 | N | 0.533 | neutral | None | None | None | None | N |
I/G | 0.9849 | likely_pathogenic | 0.9911 | pathogenic | -3.543 | Highly Destabilizing | 0.136 | N | 0.733 | prob.delet. | None | None | None | None | N |
I/H | 0.9925 | likely_pathogenic | 0.9949 | pathogenic | -3.146 | Highly Destabilizing | 0.628 | D | 0.832 | deleterious | None | None | None | None | N |
I/K | 0.9936 | likely_pathogenic | 0.9957 | pathogenic | -2.206 | Highly Destabilizing | 0.055 | N | 0.734 | prob.delet. | N | 0.513857945 | None | None | N |
I/L | 0.1236 | likely_benign | 0.1426 | benign | -1.255 | Destabilizing | None | N | 0.181 | neutral | N | 0.39704274 | None | None | N |
I/M | 0.2505 | likely_benign | 0.3445 | ambiguous | -1.351 | Destabilizing | 0.002 | N | 0.335 | neutral | N | 0.476800061 | None | None | N |
I/N | 0.9786 | likely_pathogenic | 0.9871 | pathogenic | -2.919 | Highly Destabilizing | 0.356 | N | 0.805 | deleterious | None | None | None | None | N |
I/P | 0.9924 | likely_pathogenic | 0.9947 | pathogenic | -1.825 | Destabilizing | 0.136 | N | 0.781 | deleterious | None | None | None | None | N |
I/Q | 0.9897 | likely_pathogenic | 0.993 | pathogenic | -2.56 | Highly Destabilizing | 0.356 | N | 0.8 | deleterious | None | None | None | None | N |
I/R | 0.9897 | likely_pathogenic | 0.993 | pathogenic | -2.247 | Highly Destabilizing | 0.295 | N | 0.793 | deleterious | N | 0.513857945 | None | None | N |
I/S | 0.9637 | likely_pathogenic | 0.9754 | pathogenic | -3.373 | Highly Destabilizing | 0.072 | N | 0.692 | prob.neutral | None | None | None | None | N |
I/T | 0.8891 | likely_pathogenic | 0.931 | pathogenic | -2.913 | Highly Destabilizing | 0.012 | N | 0.557 | neutral | N | 0.513857945 | None | None | N |
I/V | 0.0926 | likely_benign | 0.1033 | benign | -1.825 | Destabilizing | None | N | 0.155 | neutral | N | 0.415674147 | None | None | N |
I/W | 0.9882 | likely_pathogenic | 0.9909 | pathogenic | -2.068 | Highly Destabilizing | 0.864 | D | 0.829 | deleterious | None | None | None | None | N |
I/Y | 0.9528 | likely_pathogenic | 0.96 | pathogenic | -1.976 | Destabilizing | 0.136 | N | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.