Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2601 | 8026;8027;8028 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
N2AB | 2601 | 8026;8027;8028 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
N2A | 2601 | 8026;8027;8028 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
N2B | 2555 | 7888;7889;7890 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
Novex-1 | 2555 | 7888;7889;7890 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
Novex-2 | 2555 | 7888;7889;7890 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
Novex-3 | 2601 | 8026;8027;8028 | chr2:178773163;178773162;178773161 | chr2:179637890;179637889;179637888 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs988264686 | -0.622 | 0.007 | N | 0.321 | 0.072 | 0.184867976434 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs988264686 | -0.622 | 0.007 | N | 0.321 | 0.072 | 0.184867976434 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 2.28802E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1247 | likely_benign | 0.1533 | benign | -0.727 | Destabilizing | 0.004 | N | 0.247 | neutral | None | None | None | None | N |
K/C | 0.4701 | ambiguous | 0.5411 | ambiguous | -0.708 | Destabilizing | 0.788 | D | 0.488 | neutral | None | None | None | None | N |
K/D | 0.1581 | likely_benign | 0.1883 | benign | -0.054 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | N |
K/E | 0.0545 | likely_benign | 0.0688 | benign | 0.051 | Stabilizing | None | N | 0.119 | neutral | N | 0.294296712 | None | None | N |
K/F | 0.4689 | ambiguous | 0.5121 | ambiguous | -0.5 | Destabilizing | 0.138 | N | 0.581 | neutral | None | None | None | None | N |
K/G | 0.2244 | likely_benign | 0.2666 | benign | -1.082 | Destabilizing | 0.018 | N | 0.295 | neutral | None | None | None | None | N |
K/H | 0.203 | likely_benign | 0.2361 | benign | -1.419 | Destabilizing | 0.138 | N | 0.467 | neutral | None | None | None | None | N |
K/I | 0.1075 | likely_benign | 0.1261 | benign | 0.19 | Stabilizing | 0.017 | N | 0.503 | neutral | N | 0.473445403 | None | None | N |
K/L | 0.1287 | likely_benign | 0.1544 | benign | 0.19 | Stabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
K/M | 0.1042 | likely_benign | 0.1242 | benign | 0.172 | Stabilizing | 0.138 | N | 0.463 | neutral | None | None | None | None | N |
K/N | 0.1227 | likely_benign | 0.143 | benign | -0.423 | Destabilizing | 0.007 | N | 0.321 | neutral | N | 0.485417275 | None | None | N |
K/P | 0.3428 | ambiguous | 0.3952 | ambiguous | -0.086 | Destabilizing | 0.085 | N | 0.425 | neutral | None | None | None | None | N |
K/Q | 0.0841 | likely_benign | 0.1041 | benign | -0.548 | Destabilizing | None | N | 0.111 | neutral | N | 0.38680643 | None | None | N |
K/R | 0.0954 | likely_benign | 0.1123 | benign | -0.557 | Destabilizing | 0.007 | N | 0.323 | neutral | N | 0.440572741 | None | None | N |
K/S | 0.152 | likely_benign | 0.1792 | benign | -1.172 | Destabilizing | 0.004 | N | 0.222 | neutral | None | None | None | None | N |
K/T | 0.0708 | likely_benign | 0.0834 | benign | -0.855 | Destabilizing | 0.014 | N | 0.334 | neutral | N | 0.380129835 | None | None | N |
K/V | 0.1026 | likely_benign | 0.1255 | benign | -0.086 | Destabilizing | 0.009 | N | 0.321 | neutral | None | None | None | None | N |
K/W | 0.6093 | likely_pathogenic | 0.6511 | pathogenic | -0.316 | Destabilizing | 0.788 | D | 0.493 | neutral | None | None | None | None | N |
K/Y | 0.3318 | likely_benign | 0.3686 | ambiguous | -0.023 | Destabilizing | 0.085 | N | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.