Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26013 | 78262;78263;78264 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
N2AB | 24372 | 73339;73340;73341 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
N2A | 23445 | 70558;70559;70560 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
N2B | 16948 | 51067;51068;51069 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
Novex-1 | 17073 | 51442;51443;51444 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
Novex-2 | 17140 | 51643;51644;51645 | chr2:178568095;178568094;178568093 | chr2:179432822;179432821;179432820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs755117644 | -1.051 | 0.822 | N | 0.572 | 0.113 | 0.191931220699 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.46E-05 | 0 |
E/D | rs755117644 | -1.051 | 0.822 | N | 0.572 | 0.113 | 0.191931220699 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 2.41E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
E/D | rs755117644 | -1.051 | 0.822 | N | 0.572 | 0.113 | 0.191931220699 | gnomAD-4.0.0 | 4.64872E-05 | None | None | None | None | I | None | 4.00545E-05 | 3.336E-05 | None | 0 | 0 | None | 0 | 0 | 5.67982E-05 | 0 | 4.80538E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1754 | likely_benign | 0.1858 | benign | -0.238 | Destabilizing | 0.698 | D | 0.629 | neutral | N | 0.43545756 | None | None | I |
E/C | 0.8814 | likely_pathogenic | 0.8799 | pathogenic | -0.403 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | I |
E/D | 0.3336 | likely_benign | 0.3135 | benign | -0.816 | Destabilizing | 0.822 | D | 0.572 | neutral | N | 0.517500154 | None | None | I |
E/F | 0.8829 | likely_pathogenic | 0.8865 | pathogenic | 0.373 | Stabilizing | 0.993 | D | 0.742 | deleterious | None | None | None | None | I |
E/G | 0.3939 | ambiguous | 0.3956 | ambiguous | -0.544 | Destabilizing | 0.822 | D | 0.643 | neutral | N | 0.506205725 | None | None | I |
E/H | 0.6895 | likely_pathogenic | 0.7037 | pathogenic | 0.589 | Stabilizing | 0.978 | D | 0.565 | neutral | None | None | None | None | I |
E/I | 0.3246 | likely_benign | 0.3304 | benign | 0.575 | Stabilizing | 0.978 | D | 0.742 | deleterious | None | None | None | None | I |
E/K | 0.1677 | likely_benign | 0.1817 | benign | -0.048 | Destabilizing | 0.002 | N | 0.205 | neutral | N | 0.453526033 | None | None | I |
E/L | 0.4331 | ambiguous | 0.4577 | ambiguous | 0.575 | Stabilizing | 0.86 | D | 0.665 | neutral | None | None | None | None | I |
E/M | 0.487 | ambiguous | 0.5138 | ambiguous | 0.472 | Stabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/N | 0.5347 | ambiguous | 0.5328 | ambiguous | -0.621 | Destabilizing | 0.86 | D | 0.552 | neutral | None | None | None | None | I |
E/P | 0.3838 | ambiguous | 0.3996 | ambiguous | 0.325 | Stabilizing | 0.978 | D | 0.674 | neutral | None | None | None | None | I |
E/Q | 0.1701 | likely_benign | 0.177 | benign | -0.473 | Destabilizing | 0.822 | D | 0.571 | neutral | N | 0.494892653 | None | None | I |
E/R | 0.3387 | likely_benign | 0.3701 | ambiguous | 0.37 | Stabilizing | 0.754 | D | 0.537 | neutral | None | None | None | None | I |
E/S | 0.3516 | ambiguous | 0.3558 | ambiguous | -0.828 | Destabilizing | 0.86 | D | 0.55 | neutral | None | None | None | None | I |
E/T | 0.3154 | likely_benign | 0.3243 | benign | -0.556 | Destabilizing | 0.86 | D | 0.643 | neutral | None | None | None | None | I |
E/V | 0.2056 | likely_benign | 0.2066 | benign | 0.325 | Stabilizing | 0.942 | D | 0.66 | neutral | N | 0.502530701 | None | None | I |
E/W | 0.9788 | likely_pathogenic | 0.9798 | pathogenic | 0.581 | Stabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | I |
E/Y | 0.8228 | likely_pathogenic | 0.8301 | pathogenic | 0.637 | Stabilizing | 0.993 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.