Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26017 | 78274;78275;78276 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
N2AB | 24376 | 73351;73352;73353 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
N2A | 23449 | 70570;70571;70572 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
N2B | 16952 | 51079;51080;51081 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
Novex-1 | 17077 | 51454;51455;51456 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
Novex-2 | 17144 | 51655;51656;51657 | chr2:178568083;178568082;178568081 | chr2:179432810;179432809;179432808 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.001 | N | 0.07 | 0.103 | 0.119812018005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4695 | ambiguous | 0.4492 | ambiguous | -0.624 | Destabilizing | 0.742 | D | 0.427 | neutral | None | None | None | None | I |
N/C | 0.5807 | likely_pathogenic | 0.564 | pathogenic | 0.145 | Stabilizing | 0.996 | D | 0.469 | neutral | None | None | None | None | I |
N/D | 0.0527 | likely_benign | 0.0522 | benign | -0.929 | Destabilizing | 0.001 | N | 0.07 | neutral | N | 0.335717428 | None | None | I |
N/E | 0.7323 | likely_pathogenic | 0.7302 | pathogenic | -0.902 | Destabilizing | 0.206 | N | 0.233 | neutral | None | None | None | None | I |
N/F | 0.88 | likely_pathogenic | 0.8774 | pathogenic | -0.838 | Destabilizing | 0.984 | D | 0.491 | neutral | None | None | None | None | I |
N/G | 0.4529 | ambiguous | 0.4397 | ambiguous | -0.877 | Destabilizing | 0.543 | D | 0.329 | neutral | None | None | None | None | I |
N/H | 0.313 | likely_benign | 0.3116 | benign | -0.944 | Destabilizing | 0.979 | D | 0.425 | neutral | N | 0.509726033 | None | None | I |
N/I | 0.6745 | likely_pathogenic | 0.6506 | pathogenic | -0.02 | Destabilizing | 0.939 | D | 0.505 | neutral | N | 0.510072749 | None | None | I |
N/K | 0.7672 | likely_pathogenic | 0.7706 | pathogenic | -0.11 | Destabilizing | 0.684 | D | 0.237 | neutral | N | 0.471240199 | None | None | I |
N/L | 0.6335 | likely_pathogenic | 0.6152 | pathogenic | -0.02 | Destabilizing | 0.854 | D | 0.46 | neutral | None | None | None | None | I |
N/M | 0.736 | likely_pathogenic | 0.719 | pathogenic | 0.662 | Stabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | I |
N/P | 0.8296 | likely_pathogenic | 0.8084 | pathogenic | -0.194 | Destabilizing | 0.854 | D | 0.446 | neutral | None | None | None | None | I |
N/Q | 0.7253 | likely_pathogenic | 0.7186 | pathogenic | -0.894 | Destabilizing | 0.854 | D | 0.356 | neutral | None | None | None | None | I |
N/R | 0.7583 | likely_pathogenic | 0.7734 | pathogenic | -0.011 | Destabilizing | 0.854 | D | 0.367 | neutral | None | None | None | None | I |
N/S | 0.103 | likely_benign | 0.0981 | benign | -0.568 | Destabilizing | 0.472 | N | 0.354 | neutral | N | 0.472263723 | None | None | I |
N/T | 0.1675 | likely_benign | 0.1518 | benign | -0.382 | Destabilizing | 0.684 | D | 0.241 | neutral | N | 0.461662727 | None | None | I |
N/V | 0.5978 | likely_pathogenic | 0.5742 | pathogenic | -0.194 | Destabilizing | 0.953 | D | 0.454 | neutral | None | None | None | None | I |
N/W | 0.964 | likely_pathogenic | 0.9654 | pathogenic | -0.7 | Destabilizing | 0.996 | D | 0.586 | neutral | None | None | None | None | I |
N/Y | 0.5019 | ambiguous | 0.4961 | ambiguous | -0.425 | Destabilizing | 0.979 | D | 0.472 | neutral | N | 0.491207786 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.