Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2602 | 8029;8030;8031 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
N2AB | 2602 | 8029;8030;8031 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
N2A | 2602 | 8029;8030;8031 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
N2B | 2556 | 7891;7892;7893 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
Novex-1 | 2556 | 7891;7892;7893 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
Novex-2 | 2556 | 7891;7892;7893 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
Novex-3 | 2602 | 8029;8030;8031 | chr2:178773160;178773159;178773158 | chr2:179637887;179637886;179637885 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.885 | 0.91 | 0.78620880623 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8826E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9889 | likely_pathogenic | 0.9842 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/C | 0.8804 | likely_pathogenic | 0.8206 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.748598045 | None | None | N |
Y/D | 0.9962 | likely_pathogenic | 0.995 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.748598045 | None | None | N |
Y/E | 0.9976 | likely_pathogenic | 0.9969 | pathogenic | -1.829 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/F | 0.2117 | likely_benign | 0.2028 | benign | -0.117 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | D | 0.646389788 | None | None | N |
Y/G | 0.9847 | likely_pathogenic | 0.9787 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/H | 0.9769 | likely_pathogenic | 0.9667 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.749208973 | None | None | N |
Y/I | 0.7342 | likely_pathogenic | 0.698 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/K | 0.9974 | likely_pathogenic | 0.9962 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/L | 0.7379 | likely_pathogenic | 0.7094 | pathogenic | 0.305 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
Y/M | 0.9199 | likely_pathogenic | 0.9043 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.977 | likely_pathogenic | 0.97 | pathogenic | -1.953 | Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.748598045 | None | None | N |
Y/P | 0.9969 | likely_pathogenic | 0.9957 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/Q | 0.9976 | likely_pathogenic | 0.9965 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/R | 0.9933 | likely_pathogenic | 0.9904 | pathogenic | -1.775 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/S | 0.9897 | likely_pathogenic | 0.985 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.748598045 | None | None | N |
Y/T | 0.9912 | likely_pathogenic | 0.9875 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/V | 0.7097 | likely_pathogenic | 0.6731 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Y/W | 0.8729 | likely_pathogenic | 0.8461 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.