Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26020 | 78283;78284;78285 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
N2AB | 24379 | 73360;73361;73362 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
N2A | 23452 | 70579;70580;70581 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
N2B | 16955 | 51088;51089;51090 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
Novex-1 | 17080 | 51463;51464;51465 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
Novex-2 | 17147 | 51664;51665;51666 | chr2:178568074;178568073;178568072 | chr2:179432801;179432800;179432799 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.999 | N | 0.707 | 0.298 | 0.342168650903 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/R | None | None | 1.0 | N | 0.791 | 0.529 | 0.363944505237 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2688 | likely_benign | 0.3321 | benign | -0.448 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
S/C | 0.1784 | likely_benign | 0.2314 | benign | -0.287 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.482083661 | None | None | I |
S/D | 0.9595 | likely_pathogenic | 0.9649 | pathogenic | -0.05 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
S/E | 0.9785 | likely_pathogenic | 0.9803 | pathogenic | -0.118 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
S/F | 0.7077 | likely_pathogenic | 0.7992 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
S/G | 0.447 | ambiguous | 0.5227 | ambiguous | -0.616 | Destabilizing | 0.999 | D | 0.58 | neutral | N | 0.477566394 | None | None | I |
S/H | 0.8287 | likely_pathogenic | 0.8533 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
S/I | 0.6911 | likely_pathogenic | 0.7641 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.51965807 | None | None | I |
S/K | 0.9909 | likely_pathogenic | 0.9925 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/L | 0.3544 | ambiguous | 0.4479 | ambiguous | -0.128 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
S/M | 0.5001 | ambiguous | 0.5809 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
S/N | 0.5675 | likely_pathogenic | 0.6182 | pathogenic | -0.377 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.50813718 | None | None | I |
S/P | 0.9908 | likely_pathogenic | 0.9942 | pathogenic | -0.203 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
S/Q | 0.9439 | likely_pathogenic | 0.9505 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
S/R | 0.9865 | likely_pathogenic | 0.9898 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.480598723 | None | None | I |
S/T | 0.2005 | likely_benign | 0.2532 | benign | -0.445 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.492083614 | None | None | I |
S/V | 0.6121 | likely_pathogenic | 0.6872 | pathogenic | -0.203 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
S/W | 0.8656 | likely_pathogenic | 0.917 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
S/Y | 0.6794 | likely_pathogenic | 0.7665 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.