Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26021 | 78286;78287;78288 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
N2AB | 24380 | 73363;73364;73365 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
N2A | 23453 | 70582;70583;70584 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
N2B | 16956 | 51091;51092;51093 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
Novex-1 | 17081 | 51466;51467;51468 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
Novex-2 | 17148 | 51667;51668;51669 | chr2:178568071;178568070;178568069 | chr2:179432798;179432797;179432796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs727504982 | 0.222 | 0.001 | N | 0.13 | 0.24 | 0.252162846088 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 9.19118E-04 |
P/R | rs727504982 | 0.222 | 0.001 | N | 0.13 | 0.24 | 0.252162846088 | gnomAD-4.0.0 | 7.96077E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.76605E-05 | 0 | 8.57898E-06 | 0 | 0 |
P/T | None | None | 0.166 | N | 0.409 | 0.274 | 0.292062946507 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0583 | likely_benign | 0.056 | benign | -0.555 | Destabilizing | 0.002 | N | 0.099 | neutral | N | 0.50039726 | None | None | I |
P/C | 0.3594 | ambiguous | 0.3289 | benign | -0.664 | Destabilizing | 0.965 | D | 0.533 | neutral | None | None | None | None | I |
P/D | 0.2891 | likely_benign | 0.2628 | benign | -0.264 | Destabilizing | 0.209 | N | 0.394 | neutral | None | None | None | None | I |
P/E | 0.1734 | likely_benign | 0.1629 | benign | -0.373 | Destabilizing | 0.209 | N | 0.4 | neutral | None | None | None | None | I |
P/F | 0.4478 | ambiguous | 0.4192 | ambiguous | -0.734 | Destabilizing | 0.818 | D | 0.549 | neutral | None | None | None | None | I |
P/G | 0.2846 | likely_benign | 0.2519 | benign | -0.7 | Destabilizing | 0.103 | N | 0.401 | neutral | None | None | None | None | I |
P/H | 0.1438 | likely_benign | 0.1325 | benign | -0.249 | Destabilizing | 0.873 | D | 0.511 | neutral | N | 0.491553862 | None | None | I |
P/I | 0.2189 | likely_benign | 0.1974 | benign | -0.321 | Destabilizing | 0.39 | N | 0.555 | neutral | None | None | None | None | I |
P/K | 0.1448 | likely_benign | 0.1329 | benign | -0.469 | Destabilizing | 0.002 | N | 0.085 | neutral | None | None | None | None | I |
P/L | 0.1018 | likely_benign | 0.0958 | benign | -0.321 | Destabilizing | 0.001 | N | 0.126 | neutral | N | 0.489187232 | None | None | I |
P/M | 0.2004 | likely_benign | 0.1887 | benign | -0.34 | Destabilizing | 0.818 | D | 0.513 | neutral | None | None | None | None | I |
P/N | 0.198 | likely_benign | 0.1649 | benign | -0.215 | Destabilizing | 0.007 | N | 0.116 | neutral | None | None | None | None | I |
P/Q | 0.0975 | likely_benign | 0.089 | benign | -0.458 | Destabilizing | 0.561 | D | 0.463 | neutral | None | None | None | None | I |
P/R | 0.1221 | likely_benign | 0.1192 | benign | 0.057 | Stabilizing | 0.001 | N | 0.13 | neutral | N | 0.50395764 | None | None | I |
P/S | 0.1058 | likely_benign | 0.0906 | benign | -0.607 | Destabilizing | 0.016 | N | 0.081 | neutral | N | 0.511440973 | None | None | I |
P/T | 0.0799 | likely_benign | 0.0712 | benign | -0.611 | Destabilizing | 0.166 | N | 0.409 | neutral | N | 0.486096133 | None | None | I |
P/V | 0.1403 | likely_benign | 0.1308 | benign | -0.364 | Destabilizing | 0.209 | N | 0.42 | neutral | None | None | None | None | I |
P/W | 0.6031 | likely_pathogenic | 0.6052 | pathogenic | -0.803 | Destabilizing | 0.991 | D | 0.525 | neutral | None | None | None | None | I |
P/Y | 0.3832 | ambiguous | 0.3656 | ambiguous | -0.508 | Destabilizing | 0.901 | D | 0.55 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.