Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2602278289;78290;78291 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
N2AB2438173366;73367;73368 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
N2A2345470585;70586;70587 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
N2B1695751094;51095;51096 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
Novex-11708251469;51470;51471 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
Novex-21714951670;51671;51672 chr2:178568068;178568067;178568066chr2:179432795;179432794;179432793
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTC
  • RefSeq wild type template codon: CAG
  • Domain: Fn3-77
  • Domain position: 33
  • Structural Position: 35
  • Q(SASA): 0.2973
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/D rs562356397 -1.39 0.667 D 0.847 0.525 0.779176552023 gnomAD-2.1.1 1.21E-05 None None None None I None 0 0 None 0 0 None 9.81E-05 None 0 0 0
V/D rs562356397 -1.39 0.667 D 0.847 0.525 0.779176552023 gnomAD-3.1.2 6.58E-06 None None None None I None 0 0 0 0 0 None 0 0 0 2.06954E-04 0
V/D rs562356397 -1.39 0.667 D 0.847 0.525 0.779176552023 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
V/D rs562356397 -1.39 0.667 D 0.847 0.525 0.779176552023 gnomAD-4.0.0 2.47925E-06 None None None None I None 0 0 None 0 0 None 0 0 0 4.39194E-05 0
V/G None None 0.667 N 0.841 0.509 0.744392159427 gnomAD-4.0.0 2.05312E-06 None None None None I None 0 0 None 0 0 None 0 0 2.69882E-06 0 0
V/I rs374764110 -0.586 0.002 N 0.223 0.054 None gnomAD-2.1.1 8.96E-05 None None None None I None 4.96196E-04 2.84E-05 None 0 0 None 0 None 0 8.64E-05 1.41203E-04
V/I rs374764110 -0.586 0.002 N 0.223 0.054 None gnomAD-3.1.2 1.84143E-04 None None None None I None 5.79514E-04 0 0 0 0 None 0 0 5.88E-05 0 0
V/I rs374764110 -0.586 0.002 N 0.223 0.054 None 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
V/I rs374764110 -0.586 0.002 N 0.223 0.054 None gnomAD-4.0.0 5.45456E-05 None None None None I None 5.20097E-04 1.66783E-05 None 0 0 None 0 1.65235E-04 3.56067E-05 1.09798E-05 6.40677E-05
V/L rs374764110 None 0.022 N 0.44 0.116 0.326881540566 gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 0 None 0 6.32911E-03 0 0 0
V/L rs374764110 None 0.022 N 0.44 0.116 0.326881540566 gnomAD-4.0.0 1.31428E-05 None None None None I None 0 0 None 0 0 None 0 6.80272E-03 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.878 likely_pathogenic 0.8954 pathogenic -1.831 Destabilizing 0.104 N 0.653 neutral N 0.505098987 None None I
V/C 0.9485 likely_pathogenic 0.9538 pathogenic -1.091 Destabilizing 0.968 D 0.731 prob.delet. None None None None I
V/D 0.9888 likely_pathogenic 0.9946 pathogenic -2.184 Highly Destabilizing 0.667 D 0.847 deleterious D 0.522442773 None None I
V/E 0.9744 likely_pathogenic 0.9851 pathogenic -2.097 Highly Destabilizing 0.726 D 0.831 deleterious None None None None I
V/F 0.8429 likely_pathogenic 0.8385 pathogenic -1.286 Destabilizing 0.715 D 0.782 deleterious N 0.503071071 None None I
V/G 0.9424 likely_pathogenic 0.9613 pathogenic -2.237 Highly Destabilizing 0.667 D 0.841 deleterious N 0.512696311 None None I
V/H 0.9897 likely_pathogenic 0.9936 pathogenic -1.956 Destabilizing 0.968 D 0.822 deleterious None None None None I
V/I 0.0647 likely_benign 0.062 benign -0.762 Destabilizing 0.002 N 0.223 neutral N 0.388759692 None None I
V/K 0.9814 likely_pathogenic 0.9872 pathogenic -1.583 Destabilizing 0.726 D 0.832 deleterious None None None None I
V/L 0.3786 ambiguous 0.4002 ambiguous -0.762 Destabilizing 0.022 N 0.44 neutral N 0.516268003 None None I
V/M 0.5419 ambiguous 0.5565 ambiguous -0.493 Destabilizing 0.567 D 0.67 neutral None None None None I
V/N 0.9185 likely_pathogenic 0.9701 pathogenic -1.532 Destabilizing 0.89 D 0.849 deleterious None None None None I
V/P 0.9157 likely_pathogenic 0.9338 pathogenic -1.087 Destabilizing 0.89 D 0.823 deleterious None None None None I
V/Q 0.9752 likely_pathogenic 0.9841 pathogenic -1.594 Destabilizing 0.89 D 0.819 deleterious None None None None I
V/R 0.9742 likely_pathogenic 0.9818 pathogenic -1.144 Destabilizing 0.726 D 0.852 deleterious None None None None I
V/S 0.9304 likely_pathogenic 0.9547 pathogenic -2.042 Highly Destabilizing 0.726 D 0.812 deleterious None None None None I
V/T 0.8442 likely_pathogenic 0.8725 pathogenic -1.846 Destabilizing 0.272 N 0.726 prob.delet. None None None None I
V/W 0.9959 likely_pathogenic 0.9962 pathogenic -1.694 Destabilizing 0.968 D 0.785 deleterious None None None None I
V/Y 0.9786 likely_pathogenic 0.9827 pathogenic -1.355 Destabilizing 0.726 D 0.758 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.