Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26026 | 78301;78302;78303 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
N2AB | 24385 | 73378;73379;73380 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
N2A | 23458 | 70597;70598;70599 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
N2B | 16961 | 51106;51107;51108 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
Novex-1 | 17086 | 51481;51482;51483 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
Novex-2 | 17153 | 51682;51683;51684 | chr2:178568056;178568055;178568054 | chr2:179432783;179432782;179432781 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.904 | N | 0.61 | 0.388 | 0.328222422547 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77963E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | rs1353297321 | None | 0.97 | N | 0.635 | 0.314 | 0.369682402691 | gnomAD-4.0.0 | 6.84382E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99603E-07 | 0 | 0 |
H/Y | rs1164632947 | 0.378 | 0.014 | N | 0.479 | 0.343 | 0.229264304666 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
H/Y | rs1164632947 | 0.378 | 0.014 | N | 0.479 | 0.343 | 0.229264304666 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9344 | likely_pathogenic | 0.9503 | pathogenic | -1.956 | Destabilizing | 0.86 | D | 0.619 | neutral | None | None | None | None | N |
H/C | 0.4932 | ambiguous | 0.531 | ambiguous | -1.011 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
H/D | 0.9513 | likely_pathogenic | 0.9677 | pathogenic | -1.916 | Destabilizing | 0.99 | D | 0.661 | neutral | N | 0.518209443 | None | None | N |
H/E | 0.9314 | likely_pathogenic | 0.9481 | pathogenic | -1.729 | Destabilizing | 0.926 | D | 0.594 | neutral | None | None | None | None | N |
H/F | 0.5054 | ambiguous | 0.5246 | ambiguous | 0.027 | Stabilizing | 0.915 | D | 0.658 | neutral | None | None | None | None | N |
H/G | 0.9671 | likely_pathogenic | 0.9778 | pathogenic | -2.342 | Highly Destabilizing | 0.926 | D | 0.645 | neutral | None | None | None | None | N |
H/I | 0.6322 | likely_pathogenic | 0.6767 | pathogenic | -0.802 | Destabilizing | 0.956 | D | 0.739 | prob.delet. | None | None | None | None | N |
H/K | 0.8728 | likely_pathogenic | 0.8898 | pathogenic | -1.489 | Destabilizing | 0.978 | D | 0.659 | neutral | None | None | None | None | N |
H/L | 0.4529 | ambiguous | 0.4994 | ambiguous | -0.802 | Destabilizing | 0.698 | D | 0.685 | prob.neutral | N | 0.471341003 | None | None | N |
H/M | 0.8624 | likely_pathogenic | 0.8814 | pathogenic | -0.904 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
H/N | 0.5377 | ambiguous | 0.6283 | pathogenic | -2.042 | Highly Destabilizing | 0.904 | D | 0.61 | neutral | N | 0.504125425 | None | None | N |
H/P | 0.9917 | likely_pathogenic | 0.9952 | pathogenic | -1.18 | Destabilizing | 0.99 | D | 0.715 | prob.delet. | N | 0.503120296 | None | None | N |
H/Q | 0.7396 | likely_pathogenic | 0.771 | pathogenic | -1.618 | Destabilizing | 0.97 | D | 0.635 | neutral | N | 0.515707855 | None | None | N |
H/R | 0.5308 | ambiguous | 0.5649 | pathogenic | -1.787 | Destabilizing | 0.97 | D | 0.626 | neutral | N | 0.498063457 | None | None | N |
H/S | 0.8283 | likely_pathogenic | 0.8675 | pathogenic | -2.109 | Highly Destabilizing | 0.926 | D | 0.639 | neutral | None | None | None | None | N |
H/T | 0.8322 | likely_pathogenic | 0.8699 | pathogenic | -1.821 | Destabilizing | 0.978 | D | 0.656 | neutral | None | None | None | None | N |
H/V | 0.6616 | likely_pathogenic | 0.6978 | pathogenic | -1.18 | Destabilizing | 0.956 | D | 0.702 | prob.neutral | None | None | None | None | N |
H/W | 0.5158 | ambiguous | 0.5462 | ambiguous | 0.518 | Stabilizing | 0.994 | D | 0.725 | prob.delet. | None | None | None | None | N |
H/Y | 0.1818 | likely_benign | 0.1886 | benign | 0.267 | Stabilizing | 0.014 | N | 0.479 | neutral | N | 0.488908043 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.