Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26029 | 78310;78311;78312 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
N2AB | 24388 | 73387;73388;73389 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
N2A | 23461 | 70606;70607;70608 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
N2B | 16964 | 51115;51116;51117 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
Novex-1 | 17089 | 51490;51491;51492 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
Novex-2 | 17156 | 51691;51692;51693 | chr2:178568047;178568046;178568045 | chr2:179432774;179432773;179432772 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.002 | N | 0.389 | 0.054 | 0.180583059064 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5979 | likely_pathogenic | 0.6666 | pathogenic | -2.154 | Highly Destabilizing | 0.25 | N | 0.681 | prob.neutral | None | None | None | None | N |
R/C | 0.1392 | likely_benign | 0.1564 | benign | -2.04 | Highly Destabilizing | 0.982 | D | 0.753 | deleterious | None | None | None | None | N |
R/D | 0.9601 | likely_pathogenic | 0.9703 | pathogenic | -1.308 | Destabilizing | 0.7 | D | 0.733 | prob.delet. | None | None | None | None | N |
R/E | 0.6538 | likely_pathogenic | 0.7026 | pathogenic | -1.05 | Destabilizing | 0.25 | N | 0.671 | neutral | None | None | None | None | N |
R/F | 0.592 | likely_pathogenic | 0.6249 | pathogenic | -1.185 | Destabilizing | 0.935 | D | 0.781 | deleterious | None | None | None | None | N |
R/G | 0.5348 | ambiguous | 0.6047 | pathogenic | -2.544 | Highly Destabilizing | 0.334 | N | 0.721 | prob.delet. | N | 0.486750788 | None | None | N |
R/H | 0.1824 | likely_benign | 0.1962 | benign | -1.888 | Destabilizing | 0.826 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/I | 0.3266 | likely_benign | 0.3819 | ambiguous | -1.002 | Destabilizing | 0.781 | D | 0.78 | deleterious | N | 0.512995624 | None | None | N |
R/K | 0.1001 | likely_benign | 0.1005 | benign | -1.138 | Destabilizing | 0.002 | N | 0.389 | neutral | N | 0.43388148 | None | None | N |
R/L | 0.3727 | ambiguous | 0.4062 | ambiguous | -1.002 | Destabilizing | 0.399 | N | 0.721 | prob.delet. | None | None | None | None | N |
R/M | 0.2432 | likely_benign | 0.2697 | benign | -1.476 | Destabilizing | 0.982 | D | 0.723 | prob.delet. | None | None | None | None | N |
R/N | 0.8434 | likely_pathogenic | 0.8822 | pathogenic | -1.624 | Destabilizing | 0.7 | D | 0.679 | prob.neutral | None | None | None | None | N |
R/P | 0.9931 | likely_pathogenic | 0.9945 | pathogenic | -1.377 | Destabilizing | 0.826 | D | 0.746 | deleterious | None | None | None | None | N |
R/Q | 0.1166 | likely_benign | 0.1298 | benign | -1.432 | Destabilizing | 0.539 | D | 0.687 | prob.neutral | None | None | None | None | N |
R/S | 0.6668 | likely_pathogenic | 0.7345 | pathogenic | -2.56 | Highly Destabilizing | 0.201 | N | 0.684 | prob.neutral | N | 0.514939851 | None | None | N |
R/T | 0.4462 | ambiguous | 0.5254 | ambiguous | -2.057 | Highly Destabilizing | 0.638 | D | 0.7 | prob.neutral | N | 0.478001376 | None | None | N |
R/V | 0.3989 | ambiguous | 0.4596 | ambiguous | -1.377 | Destabilizing | 0.7 | D | 0.771 | deleterious | None | None | None | None | N |
R/W | 0.2559 | likely_benign | 0.2868 | benign | -0.609 | Destabilizing | 0.982 | D | 0.697 | prob.neutral | None | None | None | None | N |
R/Y | 0.4126 | ambiguous | 0.4451 | ambiguous | -0.551 | Destabilizing | 0.826 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.