Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26033 | 78322;78323;78324 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
N2AB | 24392 | 73399;73400;73401 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
N2A | 23465 | 70618;70619;70620 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
N2B | 16968 | 51127;51128;51129 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
Novex-1 | 17093 | 51502;51503;51504 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
Novex-2 | 17160 | 51703;51704;51705 | chr2:178568035;178568034;178568033 | chr2:179432762;179432761;179432760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1343439092 | 0.412 | 0.958 | N | 0.481 | 0.333 | 0.180583059064 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.50195E-04 | None | 0 | None | 0 | 0 | 0 |
N/D | rs1343439092 | 0.412 | 0.958 | N | 0.481 | 0.333 | 0.180583059064 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs1343439092 | 0.412 | 0.958 | N | 0.481 | 0.333 | 0.180583059064 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7414 | likely_pathogenic | 0.7659 | pathogenic | -0.12 | Destabilizing | 0.968 | D | 0.434 | neutral | None | None | None | None | I |
N/C | 0.7252 | likely_pathogenic | 0.7228 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
N/D | 0.6689 | likely_pathogenic | 0.6901 | pathogenic | 0.011 | Stabilizing | 0.958 | D | 0.481 | neutral | N | 0.49121763 | None | None | I |
N/E | 0.933 | likely_pathogenic | 0.9467 | pathogenic | -0.056 | Destabilizing | 0.968 | D | 0.462 | neutral | None | None | None | None | I |
N/F | 0.9169 | likely_pathogenic | 0.9265 | pathogenic | -0.729 | Destabilizing | 0.995 | D | 0.611 | neutral | None | None | None | None | I |
N/G | 0.5949 | likely_pathogenic | 0.6315 | pathogenic | -0.203 | Destabilizing | 0.968 | D | 0.44 | neutral | None | None | None | None | I |
N/H | 0.4078 | ambiguous | 0.4271 | ambiguous | -0.216 | Destabilizing | 0.142 | N | 0.337 | neutral | N | 0.483413561 | None | None | I |
N/I | 0.8172 | likely_pathogenic | 0.8336 | pathogenic | 0.001 | Stabilizing | 0.994 | D | 0.613 | neutral | N | 0.495023356 | None | None | I |
N/K | 0.8861 | likely_pathogenic | 0.91 | pathogenic | 0.11 | Stabilizing | 0.958 | D | 0.458 | neutral | N | 0.513057126 | None | None | I |
N/L | 0.7036 | likely_pathogenic | 0.7358 | pathogenic | 0.001 | Stabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | I |
N/M | 0.7823 | likely_pathogenic | 0.81 | pathogenic | 0.106 | Stabilizing | 1.0 | D | 0.55 | neutral | None | None | None | None | I |
N/P | 0.9352 | likely_pathogenic | 0.9443 | pathogenic | -0.017 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | I |
N/Q | 0.8526 | likely_pathogenic | 0.8737 | pathogenic | -0.319 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | I |
N/R | 0.8915 | likely_pathogenic | 0.9072 | pathogenic | 0.193 | Stabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | I |
N/S | 0.1941 | likely_benign | 0.2138 | benign | -0.066 | Destabilizing | 0.958 | D | 0.444 | neutral | N | 0.468092841 | None | None | I |
N/T | 0.4567 | ambiguous | 0.477 | ambiguous | -0.022 | Destabilizing | 0.979 | D | 0.46 | neutral | N | 0.506592514 | None | None | I |
N/V | 0.8062 | likely_pathogenic | 0.8261 | pathogenic | -0.017 | Destabilizing | 0.995 | D | 0.595 | neutral | None | None | None | None | I |
N/W | 0.9731 | likely_pathogenic | 0.9759 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
N/Y | 0.5518 | ambiguous | 0.5859 | pathogenic | -0.533 | Destabilizing | 0.976 | D | 0.531 | neutral | N | 0.495023356 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.