Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26035 | 78328;78329;78330 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
N2AB | 24394 | 73405;73406;73407 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
N2A | 23467 | 70624;70625;70626 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
N2B | 16970 | 51133;51134;51135 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
Novex-1 | 17095 | 51508;51509;51510 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
Novex-2 | 17162 | 51709;51710;51711 | chr2:178568029;178568028;178568027 | chr2:179432756;179432755;179432754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.011 | N | 0.387 | 0.151 | 0.446010312102 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9392 | likely_pathogenic | 0.9484 | pathogenic | -0.495 | Destabilizing | 0.845 | D | 0.525 | neutral | None | None | None | None | I |
I/C | 0.9835 | likely_pathogenic | 0.9848 | pathogenic | -0.798 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
I/D | 0.9941 | likely_pathogenic | 0.9939 | pathogenic | -0.159 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | I |
I/E | 0.9923 | likely_pathogenic | 0.992 | pathogenic | -0.238 | Destabilizing | 0.987 | D | 0.652 | neutral | None | None | None | None | I |
I/F | 0.6825 | likely_pathogenic | 0.7158 | pathogenic | -0.607 | Destabilizing | 0.967 | D | 0.506 | neutral | N | 0.493080664 | None | None | I |
I/G | 0.9889 | likely_pathogenic | 0.9912 | pathogenic | -0.601 | Destabilizing | 0.987 | D | 0.658 | neutral | None | None | None | None | I |
I/H | 0.9805 | likely_pathogenic | 0.9805 | pathogenic | 0.115 | Stabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
I/K | 0.9757 | likely_pathogenic | 0.9745 | pathogenic | -0.32 | Destabilizing | 0.987 | D | 0.653 | neutral | None | None | None | None | I |
I/L | 0.2015 | likely_benign | 0.2587 | benign | -0.329 | Destabilizing | 0.426 | N | 0.491 | neutral | N | 0.472765155 | None | None | I |
I/M | 0.4192 | ambiguous | 0.4647 | ambiguous | -0.645 | Destabilizing | 0.983 | D | 0.505 | neutral | N | 0.477343039 | None | None | I |
I/N | 0.9454 | likely_pathogenic | 0.9478 | pathogenic | -0.218 | Destabilizing | 0.994 | D | 0.654 | neutral | N | 0.487097102 | None | None | I |
I/P | 0.9702 | likely_pathogenic | 0.973 | pathogenic | -0.358 | Destabilizing | 0.996 | D | 0.664 | neutral | None | None | None | None | I |
I/Q | 0.9816 | likely_pathogenic | 0.9815 | pathogenic | -0.371 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | I |
I/R | 0.9577 | likely_pathogenic | 0.953 | pathogenic | 0.131 | Stabilizing | 0.987 | D | 0.65 | neutral | None | None | None | None | I |
I/S | 0.9428 | likely_pathogenic | 0.9477 | pathogenic | -0.621 | Destabilizing | 0.983 | D | 0.583 | neutral | N | 0.466145827 | None | None | I |
I/T | 0.9516 | likely_pathogenic | 0.9582 | pathogenic | -0.599 | Destabilizing | 0.892 | D | 0.501 | neutral | N | 0.470994286 | None | None | I |
I/V | 0.2568 | likely_benign | 0.2887 | benign | -0.358 | Destabilizing | 0.011 | N | 0.387 | neutral | N | 0.500239758 | None | None | I |
I/W | 0.9804 | likely_pathogenic | 0.9806 | pathogenic | -0.62 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
I/Y | 0.9336 | likely_pathogenic | 0.933 | pathogenic | -0.395 | Destabilizing | 0.987 | D | 0.532 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.