Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26042 | 78349;78350;78351 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
N2AB | 24401 | 73426;73427;73428 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
N2A | 23474 | 70645;70646;70647 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
N2B | 16977 | 51154;51155;51156 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
Novex-1 | 17102 | 51529;51530;51531 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
Novex-2 | 17169 | 51730;51731;51732 | chr2:178568008;178568007;178568006 | chr2:179432735;179432734;179432733 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1261267302 | -0.023 | 1.0 | N | 0.688 | 0.582 | 0.400033932507 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/T | rs1261267302 | -0.023 | 1.0 | N | 0.688 | 0.582 | 0.400033932507 | gnomAD-4.0.0 | 5.4749E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19687E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6777 | likely_pathogenic | 0.7435 | pathogenic | 0.012 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
K/C | 0.8989 | likely_pathogenic | 0.9152 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.7512 | likely_pathogenic | 0.7948 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/E | 0.5079 | ambiguous | 0.5844 | pathogenic | -0.25 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.504818858 | None | None | N |
K/F | 0.9617 | likely_pathogenic | 0.9717 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/G | 0.6846 | likely_pathogenic | 0.7381 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
K/H | 0.5019 | ambiguous | 0.5395 | ambiguous | -0.224 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/I | 0.8169 | likely_pathogenic | 0.8653 | pathogenic | 0.232 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.468300457 | None | None | N |
K/L | 0.7592 | likely_pathogenic | 0.8125 | pathogenic | 0.232 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
K/M | 0.6489 | likely_pathogenic | 0.7135 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/N | 0.6424 | likely_pathogenic | 0.7168 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.758 | deleterious | N | 0.468277685 | None | None | N |
K/P | 0.8118 | likely_pathogenic | 0.8509 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/Q | 0.2785 | likely_benign | 0.3272 | benign | -0.087 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.474647241 | None | None | N |
K/R | 0.0922 | likely_benign | 0.0946 | benign | -0.085 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.464897097 | None | None | N |
K/S | 0.6574 | likely_pathogenic | 0.731 | pathogenic | -0.309 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/T | 0.4156 | ambiguous | 0.5031 | ambiguous | -0.216 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.48579038 | None | None | N |
K/V | 0.7546 | likely_pathogenic | 0.8092 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/W | 0.932 | likely_pathogenic | 0.9438 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/Y | 0.8751 | likely_pathogenic | 0.895 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.