Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26044 | 78355;78356;78357 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
N2AB | 24403 | 73432;73433;73434 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
N2A | 23476 | 70651;70652;70653 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
N2B | 16979 | 51160;51161;51162 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
Novex-1 | 17104 | 51535;51536;51537 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
Novex-2 | 17171 | 51736;51737;51738 | chr2:178568002;178568001;178568000 | chr2:179432729;179432728;179432727 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs755172743 | -1.149 | 0.002 | N | 0.11 | 0.073 | 0.357519025918 | gnomAD-2.1.1 | 3.63E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.94175E-04 | None | 0 | 0 | 0 |
I/V | rs755172743 | -1.149 | 0.002 | N | 0.11 | 0.073 | 0.357519025918 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
I/V | rs755172743 | -1.149 | 0.002 | N | 0.11 | 0.073 | 0.357519025918 | gnomAD-4.0.0 | 6.81793E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.20776E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2025 | likely_benign | 0.2003 | benign | -1.869 | Destabilizing | 0.002 | N | 0.16 | neutral | None | None | None | None | N |
I/C | 0.5662 | likely_pathogenic | 0.5726 | pathogenic | -0.736 | Destabilizing | 0.92 | D | 0.357 | neutral | None | None | None | None | N |
I/D | 0.7322 | likely_pathogenic | 0.7453 | pathogenic | -1.684 | Destabilizing | 0.92 | D | 0.477 | neutral | None | None | None | None | N |
I/E | 0.6265 | likely_pathogenic | 0.6365 | pathogenic | -1.688 | Destabilizing | 0.85 | D | 0.465 | neutral | None | None | None | None | N |
I/F | 0.2003 | likely_benign | 0.2194 | benign | -1.413 | Destabilizing | 0.681 | D | 0.377 | neutral | N | 0.490158837 | None | None | N |
I/G | 0.525 | ambiguous | 0.5386 | ambiguous | -2.19 | Highly Destabilizing | 0.447 | N | 0.459 | neutral | None | None | None | None | N |
I/H | 0.5473 | ambiguous | 0.5718 | pathogenic | -1.549 | Destabilizing | 0.992 | D | 0.418 | neutral | None | None | None | None | N |
I/K | 0.3685 | ambiguous | 0.3781 | ambiguous | -1.321 | Destabilizing | 0.85 | D | 0.467 | neutral | None | None | None | None | N |
I/L | 0.0669 | likely_benign | 0.0682 | benign | -1.042 | Destabilizing | 0.001 | N | 0.079 | neutral | N | 0.350494879 | None | None | N |
I/M | 0.0883 | likely_benign | 0.092 | benign | -0.569 | Destabilizing | 0.81 | D | 0.399 | neutral | N | 0.490158837 | None | None | N |
I/N | 0.2809 | likely_benign | 0.2955 | benign | -1.021 | Destabilizing | 0.896 | D | 0.47 | neutral | N | 0.439767302 | None | None | N |
I/P | 0.2717 | likely_benign | 0.263 | benign | -1.289 | Destabilizing | 0.92 | D | 0.469 | neutral | None | None | None | None | N |
I/Q | 0.4258 | ambiguous | 0.4371 | ambiguous | -1.233 | Destabilizing | 0.92 | D | 0.457 | neutral | None | None | None | None | N |
I/R | 0.3073 | likely_benign | 0.3241 | benign | -0.667 | Destabilizing | 0.92 | D | 0.465 | neutral | None | None | None | None | N |
I/S | 0.2792 | likely_benign | 0.2893 | benign | -1.52 | Destabilizing | 0.379 | N | 0.389 | neutral | N | 0.399728834 | None | None | N |
I/T | 0.1982 | likely_benign | 0.1914 | benign | -1.424 | Destabilizing | 0.549 | D | 0.363 | neutral | N | 0.394285728 | None | None | N |
I/V | 0.055 | likely_benign | 0.0543 | benign | -1.289 | Destabilizing | 0.002 | N | 0.11 | neutral | N | 0.425974073 | None | None | N |
I/W | 0.8014 | likely_pathogenic | 0.8259 | pathogenic | -1.553 | Destabilizing | 0.992 | D | 0.482 | neutral | None | None | None | None | N |
I/Y | 0.5548 | ambiguous | 0.5895 | pathogenic | -1.36 | Destabilizing | 0.92 | D | 0.391 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.