Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26046 | 78361;78362;78363 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
N2AB | 24405 | 73438;73439;73440 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
N2A | 23478 | 70657;70658;70659 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
N2B | 16981 | 51166;51167;51168 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
Novex-1 | 17106 | 51541;51542;51543 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
Novex-2 | 17173 | 51742;51743;51744 | chr2:178567996;178567995;178567994 | chr2:179432723;179432722;179432721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs747097682 | -0.336 | 0.285 | N | 0.169 | 0.363 | 0.180583059064 | gnomAD-2.1.1 | 3.63E-05 | None | None | None | None | I | None | 0 | 2.32194E-04 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
H/N | rs747097682 | -0.336 | 0.285 | N | 0.169 | 0.363 | 0.180583059064 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/N | rs747097682 | -0.336 | 0.285 | N | 0.169 | 0.363 | 0.180583059064 | gnomAD-4.0.0 | 1.28176E-05 | None | None | None | None | I | None | 0 | 1.69601E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs780141110 | -0.58 | 0.166 | N | 0.161 | 0.13 | None | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | I | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs780141110 | -0.58 | 0.166 | N | 0.161 | 0.13 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs780141110 | -0.58 | 0.166 | N | 0.161 | 0.13 | None | gnomAD-4.0.0 | 3.04495E-06 | None | None | None | None | I | None | 3.4943E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20496E-06 | 0 | 0 |
H/Y | rs747097682 | 1.071 | 0.856 | N | 0.224 | 0.354 | 0.257292322809 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs747097682 | 1.071 | 0.856 | N | 0.224 | 0.354 | 0.257292322809 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Y | rs747097682 | 1.071 | 0.856 | N | 0.224 | 0.354 | 0.257292322809 | gnomAD-4.0.0 | 3.84526E-06 | None | None | None | None | I | None | 0 | 1.69601E-05 | None | 0 | 0 | None | 0 | 0 | 2.39415E-06 | 1.34037E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.109 | likely_benign | 0.1104 | benign | 0.101 | Stabilizing | 0.187 | N | 0.212 | neutral | None | None | None | None | I |
H/C | 0.1032 | likely_benign | 0.105 | benign | 0.487 | Stabilizing | 0.991 | D | 0.286 | neutral | None | None | None | None | I |
H/D | 0.1671 | likely_benign | 0.1819 | benign | -0.186 | Destabilizing | 0.285 | N | 0.218 | neutral | N | 0.382415296 | None | None | I |
H/E | 0.1728 | likely_benign | 0.1877 | benign | -0.152 | Destabilizing | 0.103 | N | 0.096 | neutral | None | None | None | None | I |
H/F | 0.247 | likely_benign | 0.2579 | benign | 0.9 | Stabilizing | 0.965 | D | 0.353 | neutral | None | None | None | None | I |
H/G | 0.1379 | likely_benign | 0.1432 | benign | -0.18 | Destabilizing | 0.345 | N | 0.199 | neutral | None | None | None | None | I |
H/I | 0.1896 | likely_benign | 0.2092 | benign | 0.824 | Stabilizing | 0.722 | D | 0.392 | neutral | None | None | None | None | I |
H/K | 0.118 | likely_benign | 0.1217 | benign | 0.004 | Stabilizing | 0.209 | N | 0.213 | neutral | None | None | None | None | I |
H/L | 0.0812 | likely_benign | 0.081 | benign | 0.824 | Stabilizing | 0.285 | N | 0.268 | neutral | N | 0.407753671 | None | None | I |
H/M | 0.26 | likely_benign | 0.2735 | benign | 0.543 | Stabilizing | 0.901 | D | 0.302 | neutral | None | None | None | None | I |
H/N | 0.0723 | likely_benign | 0.0727 | benign | -0.103 | Destabilizing | 0.285 | N | 0.169 | neutral | N | 0.410063258 | None | None | I |
H/P | 0.0709 | likely_benign | 0.071 | benign | 0.607 | Stabilizing | None | N | 0.113 | neutral | N | 0.35630613 | None | None | I |
H/Q | 0.0804 | likely_benign | 0.082 | benign | 0.024 | Stabilizing | 0.002 | N | 0.069 | neutral | N | 0.371408869 | None | None | I |
H/R | 0.0621 | likely_benign | 0.0647 | benign | -0.55 | Destabilizing | 0.166 | N | 0.161 | neutral | N | 0.374083815 | None | None | I |
H/S | 0.0994 | likely_benign | 0.1026 | benign | 0.004 | Stabilizing | 0.345 | N | 0.204 | neutral | None | None | None | None | I |
H/T | 0.0989 | likely_benign | 0.1055 | benign | 0.136 | Stabilizing | 0.345 | N | 0.243 | neutral | None | None | None | None | I |
H/V | 0.1384 | likely_benign | 0.1503 | benign | 0.607 | Stabilizing | 0.517 | D | 0.316 | neutral | None | None | None | None | I |
H/W | 0.3204 | likely_benign | 0.3343 | benign | 0.937 | Stabilizing | 0.991 | D | 0.28 | neutral | None | None | None | None | I |
H/Y | 0.0934 | likely_benign | 0.0948 | benign | 1.136 | Stabilizing | 0.856 | D | 0.224 | neutral | N | 0.470746357 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.