Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26050 | 78373;78374;78375 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
N2AB | 24409 | 73450;73451;73452 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
N2A | 23482 | 70669;70670;70671 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
N2B | 16985 | 51178;51179;51180 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
Novex-1 | 17110 | 51553;51554;51555 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
Novex-2 | 17177 | 51754;51755;51756 | chr2:178567984;178567983;178567982 | chr2:179432711;179432710;179432709 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.003 | N | 0.191 | 0.284 | 0.229264304666 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7912 | likely_pathogenic | 0.8144 | pathogenic | -2.386 | Highly Destabilizing | 0.742 | D | 0.521 | neutral | None | None | None | None | N |
F/C | 0.3219 | likely_benign | 0.344 | ambiguous | -1.537 | Destabilizing | 0.994 | D | 0.615 | neutral | N | 0.467863292 | None | None | N |
F/D | 0.9643 | likely_pathogenic | 0.9716 | pathogenic | -2.283 | Highly Destabilizing | 0.984 | D | 0.637 | neutral | None | None | None | None | N |
F/E | 0.9532 | likely_pathogenic | 0.9614 | pathogenic | -2.11 | Highly Destabilizing | 0.953 | D | 0.63 | neutral | None | None | None | None | N |
F/G | 0.8872 | likely_pathogenic | 0.8992 | pathogenic | -2.781 | Highly Destabilizing | 0.854 | D | 0.62 | neutral | None | None | None | None | N |
F/H | 0.6749 | likely_pathogenic | 0.7196 | pathogenic | -1.081 | Destabilizing | 0.91 | D | 0.521 | neutral | None | None | None | None | N |
F/I | 0.401 | ambiguous | 0.3961 | ambiguous | -1.132 | Destabilizing | 0.521 | D | 0.423 | neutral | N | 0.471293106 | None | None | N |
F/K | 0.9448 | likely_pathogenic | 0.9514 | pathogenic | -1.994 | Destabilizing | 0.953 | D | 0.629 | neutral | None | None | None | None | N |
F/L | 0.8364 | likely_pathogenic | 0.8012 | pathogenic | -1.132 | Destabilizing | 0.003 | N | 0.191 | neutral | N | 0.495121939 | None | None | N |
F/M | 0.5321 | ambiguous | 0.5022 | ambiguous | -0.816 | Destabilizing | 0.91 | D | 0.417 | neutral | None | None | None | None | N |
F/N | 0.8581 | likely_pathogenic | 0.8843 | pathogenic | -2.419 | Highly Destabilizing | 0.953 | D | 0.639 | neutral | None | None | None | None | N |
F/P | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -1.554 | Destabilizing | 0.984 | D | 0.667 | neutral | None | None | None | None | N |
F/Q | 0.8687 | likely_pathogenic | 0.8796 | pathogenic | -2.365 | Highly Destabilizing | 0.984 | D | 0.667 | neutral | None | None | None | None | N |
F/R | 0.8992 | likely_pathogenic | 0.9102 | pathogenic | -1.465 | Destabilizing | 0.953 | D | 0.639 | neutral | None | None | None | None | N |
F/S | 0.7196 | likely_pathogenic | 0.7806 | pathogenic | -3.071 | Highly Destabilizing | 0.815 | D | 0.574 | neutral | N | 0.50598436 | None | None | N |
F/T | 0.8092 | likely_pathogenic | 0.8349 | pathogenic | -2.792 | Highly Destabilizing | 0.742 | D | 0.548 | neutral | None | None | None | None | N |
F/V | 0.3848 | ambiguous | 0.392 | ambiguous | -1.554 | Destabilizing | 0.521 | D | 0.457 | neutral | N | 0.518284014 | None | None | N |
F/W | 0.4945 | ambiguous | 0.524 | ambiguous | -0.202 | Destabilizing | 0.953 | D | 0.434 | neutral | None | None | None | None | N |
F/Y | 0.1236 | likely_benign | 0.1431 | benign | -0.533 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.426414003 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.