Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26052 | 78379;78380;78381 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
N2AB | 24411 | 73456;73457;73458 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
N2A | 23484 | 70675;70676;70677 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
N2B | 16987 | 51184;51185;51186 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
Novex-1 | 17112 | 51559;51560;51561 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
Novex-2 | 17179 | 51760;51761;51762 | chr2:178567978;178567977;178567976 | chr2:179432705;179432704;179432703 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1706569332 | None | None | N | 0.299 | 0.071 | 0.107399877778 | gnomAD-4.0.0 | 3.18371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55093E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3215 | likely_benign | 0.2966 | benign | -0.695 | Destabilizing | 0.356 | N | 0.673 | neutral | None | None | None | None | N |
A/D | 0.7799 | likely_pathogenic | 0.7977 | pathogenic | -1.958 | Destabilizing | 0.038 | N | 0.733 | prob.delet. | None | None | None | None | N |
A/E | 0.6958 | likely_pathogenic | 0.7087 | pathogenic | -1.692 | Destabilizing | 0.055 | N | 0.686 | prob.neutral | N | 0.490700807 | None | None | N |
A/F | 0.434 | ambiguous | 0.4203 | ambiguous | -0.423 | Destabilizing | 0.214 | N | 0.811 | deleterious | None | None | None | None | N |
A/G | 0.2491 | likely_benign | 0.2428 | benign | -1.273 | Destabilizing | 0.024 | N | 0.553 | neutral | N | 0.479091012 | None | None | N |
A/H | 0.8215 | likely_pathogenic | 0.8064 | pathogenic | -1.916 | Destabilizing | 0.356 | N | 0.812 | deleterious | None | None | None | None | N |
A/I | 0.141 | likely_benign | 0.1435 | benign | 0.783 | Stabilizing | 0.013 | N | 0.685 | prob.neutral | None | None | None | None | N |
A/K | 0.9103 | likely_pathogenic | 0.9103 | pathogenic | -0.839 | Destabilizing | 0.072 | N | 0.686 | prob.neutral | None | None | None | None | N |
A/L | 0.1745 | likely_benign | 0.1696 | benign | 0.783 | Stabilizing | 0.016 | N | 0.644 | neutral | None | None | None | None | N |
A/M | 0.1999 | likely_benign | 0.1883 | benign | 0.468 | Stabilizing | 0.214 | N | 0.775 | deleterious | None | None | None | None | N |
A/N | 0.5342 | ambiguous | 0.5404 | ambiguous | -1.285 | Destabilizing | 0.001 | N | 0.581 | neutral | None | None | None | None | N |
A/P | 0.7504 | likely_pathogenic | 0.7558 | pathogenic | 0.327 | Stabilizing | 0.106 | N | 0.753 | deleterious | N | 0.472596552 | None | None | N |
A/Q | 0.7374 | likely_pathogenic | 0.7297 | pathogenic | -0.947 | Destabilizing | 0.356 | N | 0.795 | deleterious | None | None | None | None | N |
A/R | 0.8904 | likely_pathogenic | 0.8887 | pathogenic | -1.221 | Destabilizing | 0.072 | N | 0.773 | deleterious | None | None | None | None | N |
A/S | 0.1164 | likely_benign | 0.1155 | benign | -1.714 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.517190723 | None | None | N |
A/T | 0.0749 | likely_benign | 0.0709 | benign | -1.288 | Destabilizing | None | N | 0.255 | neutral | N | 0.44248232 | None | None | N |
A/V | 0.0726 | likely_benign | 0.0752 | benign | 0.327 | Stabilizing | None | N | 0.299 | neutral | N | 0.367746914 | None | None | N |
A/W | 0.8941 | likely_pathogenic | 0.885 | pathogenic | -1.289 | Destabilizing | 0.864 | D | 0.813 | deleterious | None | None | None | None | N |
A/Y | 0.656 | likely_pathogenic | 0.6331 | pathogenic | -0.603 | Destabilizing | 0.356 | N | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.