Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26054 | 78385;78386;78387 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
N2AB | 24413 | 73462;73463;73464 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
N2A | 23486 | 70681;70682;70683 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
N2B | 16989 | 51190;51191;51192 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
Novex-1 | 17114 | 51565;51566;51567 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
Novex-2 | 17181 | 51766;51767;51768 | chr2:178567972;178567971;178567970 | chr2:179432699;179432698;179432697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.98 | N | 0.439 | 0.258 | 0.337621943819 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1385 | likely_benign | 0.1579 | benign | -0.196 | Destabilizing | 0.97 | D | 0.443 | neutral | None | None | None | None | N |
N/C | 0.1616 | likely_benign | 0.1783 | benign | 0.314 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
N/D | 0.1126 | likely_benign | 0.1297 | benign | 0.118 | Stabilizing | 0.98 | D | 0.472 | neutral | N | 0.448792217 | None | None | N |
N/E | 0.2818 | likely_benign | 0.3336 | benign | 0.063 | Stabilizing | 0.985 | D | 0.434 | neutral | None | None | None | None | N |
N/F | 0.3296 | likely_benign | 0.3749 | ambiguous | -0.677 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
N/G | 0.1377 | likely_benign | 0.1544 | benign | -0.325 | Destabilizing | 0.965 | D | 0.464 | neutral | None | None | None | None | N |
N/H | 0.093 | likely_benign | 0.0984 | benign | -0.329 | Destabilizing | 0.998 | D | 0.471 | neutral | N | 0.47261346 | None | None | N |
N/I | 0.1792 | likely_benign | 0.2025 | benign | 0.049 | Stabilizing | 0.998 | D | 0.569 | neutral | N | 0.480121878 | None | None | N |
N/K | 0.2372 | likely_benign | 0.2818 | benign | 0.153 | Stabilizing | 0.98 | D | 0.433 | neutral | N | 0.495124726 | None | None | N |
N/L | 0.1765 | likely_benign | 0.1855 | benign | 0.049 | Stabilizing | 0.996 | D | 0.498 | neutral | None | None | None | None | N |
N/M | 0.2277 | likely_benign | 0.2489 | benign | 0.275 | Stabilizing | 1.0 | D | 0.524 | neutral | None | None | None | None | N |
N/P | 0.3927 | ambiguous | 0.3738 | ambiguous | -0.008 | Destabilizing | 0.041 | N | 0.287 | neutral | None | None | None | None | N |
N/Q | 0.2212 | likely_benign | 0.2514 | benign | -0.238 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
N/R | 0.3067 | likely_benign | 0.3555 | ambiguous | 0.241 | Stabilizing | 0.999 | D | 0.438 | neutral | None | None | None | None | N |
N/S | 0.0841 | likely_benign | 0.0917 | benign | -0.002 | Destabilizing | 0.98 | D | 0.493 | neutral | N | 0.490449625 | None | None | N |
N/T | 0.1052 | likely_benign | 0.1191 | benign | 0.068 | Stabilizing | 0.98 | D | 0.439 | neutral | N | 0.479614899 | None | None | N |
N/V | 0.1718 | likely_benign | 0.1931 | benign | -0.008 | Destabilizing | 0.996 | D | 0.507 | neutral | None | None | None | None | N |
N/W | 0.6416 | likely_pathogenic | 0.7032 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
N/Y | 0.1175 | likely_benign | 0.1293 | benign | -0.436 | Destabilizing | 0.998 | D | 0.528 | neutral | N | 0.509328949 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.