Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26064 | 78415;78416;78417 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
N2AB | 24423 | 73492;73493;73494 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
N2A | 23496 | 70711;70712;70713 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
N2B | 16999 | 51220;51221;51222 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
Novex-1 | 17124 | 51595;51596;51597 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
Novex-2 | 17191 | 51796;51797;51798 | chr2:178567942;178567941;178567940 | chr2:179432669;179432668;179432667 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs767325298 | -2.576 | 0.505 | D | 0.549 | 0.446 | 0.580120749226 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
R/K | None | None | 0.003 | N | 0.338 | 0.281 | 0.329020015101 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9551 | likely_pathogenic | 0.9722 | pathogenic | -2.174 | Highly Destabilizing | 0.404 | N | 0.561 | neutral | None | None | None | None | N |
R/C | 0.5021 | ambiguous | 0.5288 | ambiguous | -1.905 | Destabilizing | 0.991 | D | 0.771 | deleterious | None | None | None | None | N |
R/D | 0.9968 | likely_pathogenic | 0.9978 | pathogenic | -1.136 | Destabilizing | 0.404 | N | 0.55 | neutral | None | None | None | None | N |
R/E | 0.9526 | likely_pathogenic | 0.9669 | pathogenic | -0.913 | Destabilizing | 0.004 | N | 0.502 | neutral | None | None | None | None | N |
R/F | 0.9754 | likely_pathogenic | 0.9775 | pathogenic | -1.312 | Destabilizing | 0.967 | D | 0.752 | deleterious | None | None | None | None | N |
R/G | 0.959 | likely_pathogenic | 0.9732 | pathogenic | -2.501 | Highly Destabilizing | 0.505 | D | 0.549 | neutral | D | 0.55332582 | None | None | N |
R/H | 0.3856 | ambiguous | 0.3536 | ambiguous | -2.275 | Highly Destabilizing | 0.906 | D | 0.58 | neutral | None | None | None | None | N |
R/I | 0.8677 | likely_pathogenic | 0.9054 | pathogenic | -1.21 | Destabilizing | 0.879 | D | 0.747 | deleterious | D | 0.526827774 | None | None | N |
R/K | 0.1839 | likely_benign | 0.2129 | benign | -1.247 | Destabilizing | 0.003 | N | 0.338 | neutral | N | 0.487666295 | None | None | N |
R/L | 0.8542 | likely_pathogenic | 0.8835 | pathogenic | -1.21 | Destabilizing | 0.575 | D | 0.565 | neutral | None | None | None | None | N |
R/M | 0.8677 | likely_pathogenic | 0.9059 | pathogenic | -1.702 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
R/N | 0.984 | likely_pathogenic | 0.9885 | pathogenic | -1.348 | Destabilizing | 0.575 | D | 0.518 | neutral | None | None | None | None | N |
R/P | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -1.523 | Destabilizing | 0.906 | D | 0.677 | prob.neutral | None | None | None | None | N |
R/Q | 0.3797 | ambiguous | 0.416 | ambiguous | -1.175 | Destabilizing | 0.404 | N | 0.584 | neutral | None | None | None | None | N |
R/S | 0.9745 | likely_pathogenic | 0.9832 | pathogenic | -2.218 | Highly Destabilizing | 0.338 | N | 0.522 | neutral | D | 0.531926201 | None | None | N |
R/T | 0.9304 | likely_pathogenic | 0.9399 | pathogenic | -1.789 | Destabilizing | 0.505 | D | 0.528 | neutral | N | 0.511290732 | None | None | N |
R/V | 0.8956 | likely_pathogenic | 0.9245 | pathogenic | -1.523 | Destabilizing | 0.826 | D | 0.655 | neutral | None | None | None | None | N |
R/W | 0.8045 | likely_pathogenic | 0.8017 | pathogenic | -0.842 | Destabilizing | 0.991 | D | 0.738 | prob.delet. | None | None | None | None | N |
R/Y | 0.9385 | likely_pathogenic | 0.9399 | pathogenic | -0.749 | Destabilizing | 0.967 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.