Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26069 | 78430;78431;78432 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
N2AB | 24428 | 73507;73508;73509 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
N2A | 23501 | 70726;70727;70728 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
N2B | 17004 | 51235;51236;51237 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
Novex-1 | 17129 | 51610;51611;51612 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
Novex-2 | 17196 | 51811;51812;51813 | chr2:178567927;178567926;178567925 | chr2:179432654;179432653;179432652 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs751057466 | -1.126 | 0.999 | N | 0.597 | 0.603 | 0.332902724076 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65837E-04 |
N/S | rs751057466 | -1.126 | 0.999 | N | 0.597 | 0.603 | 0.332902724076 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -0.872 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
N/C | 0.9912 | likely_pathogenic | 0.991 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
N/D | 0.9923 | likely_pathogenic | 0.9935 | pathogenic | -2.155 | Highly Destabilizing | 0.999 | D | 0.615 | neutral | D | 0.559086265 | None | None | N |
N/E | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.975 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/F | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
N/G | 0.9955 | likely_pathogenic | 0.996 | pathogenic | -1.195 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
N/H | 0.9938 | likely_pathogenic | 0.9945 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.560100223 | None | None | N |
N/I | 0.9976 | likely_pathogenic | 0.998 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.560607202 | None | None | N |
N/K | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.758 | deleterious | D | 0.547983449 | None | None | N |
N/L | 0.9946 | likely_pathogenic | 0.9953 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
N/M | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
N/P | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/Q | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
N/R | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/S | 0.9701 | likely_pathogenic | 0.9734 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.51556992 | None | None | N |
N/T | 0.9866 | likely_pathogenic | 0.989 | pathogenic | -0.835 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | N | 0.507893236 | None | None | N |
N/V | 0.9971 | likely_pathogenic | 0.9974 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
N/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
N/Y | 0.9962 | likely_pathogenic | 0.9965 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.560353712 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.