Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26078 | 78457;78458;78459 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
N2AB | 24437 | 73534;73535;73536 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
N2A | 23510 | 70753;70754;70755 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
N2B | 17013 | 51262;51263;51264 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
Novex-1 | 17138 | 51637;51638;51639 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
Novex-2 | 17205 | 51838;51839;51840 | chr2:178567900;178567899;178567898 | chr2:179432627;179432626;179432625 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1706533541 | None | 0.986 | N | 0.705 | 0.231 | 0.223847106136 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1706533541 | None | 0.986 | N | 0.705 | 0.231 | 0.223847106136 | gnomAD-4.0.0 | 6.57531E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.716 | likely_pathogenic | 0.7838 | pathogenic | 0.023 | Stabilizing | 0.963 | D | 0.684 | prob.delet. | None | None | None | None | N |
K/C | 0.8948 | likely_pathogenic | 0.9157 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/D | 0.902 | likely_pathogenic | 0.9247 | pathogenic | 0.092 | Stabilizing | 0.995 | D | 0.697 | prob.delet. | None | None | None | None | N |
K/E | 0.5708 | likely_pathogenic | 0.6433 | pathogenic | 0.08 | Stabilizing | 0.952 | D | 0.691 | prob.delet. | N | 0.475298454 | None | None | N |
K/F | 0.9594 | likely_pathogenic | 0.9695 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/G | 0.7889 | likely_pathogenic | 0.8454 | pathogenic | -0.139 | Destabilizing | 0.995 | D | 0.69 | prob.delet. | None | None | None | None | N |
K/H | 0.614 | likely_pathogenic | 0.6551 | pathogenic | -0.408 | Destabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | N |
K/I | 0.7744 | likely_pathogenic | 0.8242 | pathogenic | 0.363 | Stabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
K/L | 0.7408 | likely_pathogenic | 0.7847 | pathogenic | 0.363 | Stabilizing | 0.989 | D | 0.69 | prob.delet. | None | None | None | None | N |
K/M | 0.6772 | likely_pathogenic | 0.7389 | pathogenic | 0.236 | Stabilizing | 0.999 | D | 0.731 | deleterious | N | 0.474478975 | None | None | N |
K/N | 0.8302 | likely_pathogenic | 0.8669 | pathogenic | 0.321 | Stabilizing | 0.986 | D | 0.705 | prob.delet. | N | 0.47697051 | None | None | N |
K/P | 0.782 | likely_pathogenic | 0.8466 | pathogenic | 0.276 | Stabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Q | 0.3316 | likely_benign | 0.4012 | ambiguous | 0.112 | Stabilizing | 0.986 | D | 0.7 | prob.delet. | N | 0.505816149 | None | None | N |
K/R | 0.0994 | likely_benign | 0.1067 | benign | 0.075 | Stabilizing | 0.125 | N | 0.463 | neutral | N | 0.507952377 | None | None | N |
K/S | 0.81 | likely_pathogenic | 0.8616 | pathogenic | -0.168 | Destabilizing | 0.963 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/T | 0.6332 | likely_pathogenic | 0.7114 | pathogenic | -0.043 | Destabilizing | 0.993 | D | 0.681 | prob.neutral | N | 0.515513067 | None | None | N |
K/V | 0.7037 | likely_pathogenic | 0.76 | pathogenic | 0.276 | Stabilizing | 0.995 | D | 0.744 | deleterious | None | None | None | None | N |
K/W | 0.9337 | likely_pathogenic | 0.9487 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/Y | 0.8941 | likely_pathogenic | 0.9165 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.