Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26081 | 78466;78467;78468 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
N2AB | 24440 | 73543;73544;73545 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
N2A | 23513 | 70762;70763;70764 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
N2B | 17016 | 51271;51272;51273 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
Novex-1 | 17141 | 51646;51647;51648 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
Novex-2 | 17208 | 51847;51848;51849 | chr2:178567891;178567890;178567889 | chr2:179432618;179432617;179432616 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs768895653 | 0.021 | 0.997 | N | 0.537 | 0.11 | 0.104622674875 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/D | rs768895653 | 0.021 | 0.997 | N | 0.537 | 0.11 | 0.104622674875 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs768895653 | 0.021 | 0.997 | N | 0.537 | 0.11 | 0.104622674875 | gnomAD-4.0.0 | 1.30155E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.6107E-05 | 0 | 3.20318E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2707 | likely_benign | 0.2992 | benign | -0.339 | Destabilizing | 0.997 | D | 0.778 | deleterious | N | 0.458473137 | None | None | I |
E/C | 0.9376 | likely_pathogenic | 0.9377 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
E/D | 0.1365 | likely_benign | 0.1214 | benign | -0.303 | Destabilizing | 0.997 | D | 0.537 | neutral | N | 0.479853338 | None | None | I |
E/F | 0.9073 | likely_pathogenic | 0.9234 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | None | None | None | None | I |
E/G | 0.3544 | ambiguous | 0.3711 | ambiguous | -0.519 | Destabilizing | 0.999 | D | 0.66 | prob.neutral | N | 0.467564944 | None | None | I |
E/H | 0.7677 | likely_pathogenic | 0.7889 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/I | 0.5755 | likely_pathogenic | 0.6107 | pathogenic | 0.1 | Stabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | I |
E/K | 0.3662 | ambiguous | 0.401 | ambiguous | 0.229 | Stabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.453068313 | None | None | I |
E/L | 0.6529 | likely_pathogenic | 0.683 | pathogenic | 0.1 | Stabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/M | 0.7184 | likely_pathogenic | 0.7483 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | None | None | None | None | I |
E/N | 0.4091 | ambiguous | 0.43 | ambiguous | -0.137 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | I |
E/P | 0.5865 | likely_pathogenic | 0.6128 | pathogenic | -0.028 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | I |
E/Q | 0.2913 | likely_benign | 0.3227 | benign | -0.092 | Destabilizing | 0.999 | D | 0.694 | prob.delet. | N | 0.460728089 | None | None | I |
E/R | 0.5719 | likely_pathogenic | 0.6094 | pathogenic | 0.578 | Stabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
E/S | 0.3396 | likely_benign | 0.369 | ambiguous | -0.306 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | I |
E/T | 0.4023 | ambiguous | 0.4427 | ambiguous | -0.15 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | I |
E/V | 0.3881 | ambiguous | 0.429 | ambiguous | -0.028 | Destabilizing | 0.999 | D | 0.691 | prob.delet. | N | 0.46426958 | None | None | I |
E/W | 0.9795 | likely_pathogenic | 0.9818 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/Y | 0.8511 | likely_pathogenic | 0.8664 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.