Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26084 | 78475;78476;78477 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
N2AB | 24443 | 73552;73553;73554 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
N2A | 23516 | 70771;70772;70773 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
N2B | 17019 | 51280;51281;51282 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
Novex-1 | 17144 | 51655;51656;51657 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
Novex-2 | 17211 | 51856;51857;51858 | chr2:178567882;178567881;178567880 | chr2:179432609;179432608;179432607 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1252241115 | None | 0.002 | N | 0.23 | 0.143 | 0.392547445146 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs1252241115 | None | 0.002 | N | 0.23 | 0.143 | 0.392547445146 | gnomAD-4.0.0 | 6.57497E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
V/I | None | None | 0.002 | N | 0.171 | 0.084 | 0.320256813643 | gnomAD-4.0.0 | 3.18356E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54631E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1728 | likely_benign | 0.2328 | benign | -1.351 | Destabilizing | 0.002 | N | 0.23 | neutral | N | 0.495447226 | None | None | N |
V/C | 0.6909 | likely_pathogenic | 0.7612 | pathogenic | -0.928 | Destabilizing | 0.012 | N | 0.491 | neutral | None | None | None | None | N |
V/D | 0.6323 | likely_pathogenic | 0.7305 | pathogenic | -0.95 | Destabilizing | 0.842 | D | 0.739 | deleterious | None | None | None | None | N |
V/E | 0.4983 | ambiguous | 0.5831 | pathogenic | -0.96 | Destabilizing | 0.664 | D | 0.614 | neutral | N | 0.511859474 | None | None | N |
V/F | 0.1994 | likely_benign | 0.2141 | benign | -1.025 | Destabilizing | 0.005 | N | 0.443 | neutral | None | None | None | None | N |
V/G | 0.3353 | likely_benign | 0.4373 | ambiguous | -1.656 | Destabilizing | 0.22 | N | 0.695 | prob.delet. | N | 0.505104851 | None | None | N |
V/H | 0.6971 | likely_pathogenic | 0.7595 | pathogenic | -1.083 | Destabilizing | 0.984 | D | 0.701 | prob.delet. | None | None | None | None | N |
V/I | 0.0736 | likely_benign | 0.0763 | benign | -0.624 | Destabilizing | 0.002 | N | 0.171 | neutral | N | 0.485056875 | None | None | N |
V/K | 0.5571 | ambiguous | 0.6519 | pathogenic | -1.104 | Destabilizing | 0.724 | D | 0.617 | neutral | None | None | None | None | N |
V/L | 0.1837 | likely_benign | 0.239 | benign | -0.624 | Destabilizing | 0.039 | N | 0.471 | neutral | N | 0.500332971 | None | None | N |
V/M | 0.1472 | likely_benign | 0.1764 | benign | -0.492 | Destabilizing | 0.724 | D | 0.439 | neutral | None | None | None | None | N |
V/N | 0.3992 | ambiguous | 0.5094 | ambiguous | -0.893 | Destabilizing | 0.842 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/P | 0.4952 | ambiguous | 0.5983 | pathogenic | -0.831 | Destabilizing | 0.842 | D | 0.643 | neutral | None | None | None | None | N |
V/Q | 0.4624 | ambiguous | 0.5415 | ambiguous | -1.064 | Destabilizing | 0.842 | D | 0.619 | neutral | None | None | None | None | N |
V/R | 0.474 | ambiguous | 0.5694 | pathogenic | -0.559 | Destabilizing | 0.724 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.2588 | likely_benign | 0.3393 | benign | -1.445 | Destabilizing | 0.272 | N | 0.576 | neutral | None | None | None | None | N |
V/T | 0.1539 | likely_benign | 0.1765 | benign | -1.341 | Destabilizing | 0.428 | N | 0.483 | neutral | None | None | None | None | N |
V/W | 0.8471 | likely_pathogenic | 0.8775 | pathogenic | -1.175 | Destabilizing | 0.984 | D | 0.733 | deleterious | None | None | None | None | N |
V/Y | 0.6037 | likely_pathogenic | 0.6604 | pathogenic | -0.892 | Destabilizing | 0.568 | D | 0.516 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.