Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26086 | 78481;78482;78483 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
N2AB | 24445 | 73558;73559;73560 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
N2A | 23518 | 70777;70778;70779 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
N2B | 17021 | 51286;51287;51288 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
Novex-1 | 17146 | 51661;51662;51663 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
Novex-2 | 17213 | 51862;51863;51864 | chr2:178567876;178567875;178567874 | chr2:179432603;179432602;179432601 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1394737177 | -0.124 | 0.894 | N | 0.497 | 0.111 | 0.250039746154 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7179 | likely_pathogenic | 0.6465 | pathogenic | -0.634 | Destabilizing | 0.982 | D | 0.533 | neutral | None | None | None | None | N |
R/C | 0.215 | likely_benign | 0.1705 | benign | -0.583 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
R/D | 0.9491 | likely_pathogenic | 0.9292 | pathogenic | -0.076 | Destabilizing | 0.995 | D | 0.56 | neutral | None | None | None | None | N |
R/E | 0.7036 | likely_pathogenic | 0.6412 | pathogenic | 0.012 | Stabilizing | 0.965 | D | 0.483 | neutral | None | None | None | None | N |
R/F | 0.7252 | likely_pathogenic | 0.6762 | pathogenic | -0.698 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
R/G | 0.6593 | likely_pathogenic | 0.5892 | pathogenic | -0.893 | Destabilizing | 0.988 | D | 0.499 | neutral | N | 0.462487106 | None | None | N |
R/H | 0.1507 | likely_benign | 0.121 | benign | -1.233 | Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
R/I | 0.4097 | ambiguous | 0.3927 | ambiguous | 0.043 | Stabilizing | 0.999 | D | 0.845 | deleterious | N | 0.467375404 | None | None | N |
R/K | 0.1605 | likely_benign | 0.1362 | benign | -0.661 | Destabilizing | 0.894 | D | 0.497 | neutral | N | 0.475050525 | None | None | N |
R/L | 0.398 | ambiguous | 0.3569 | ambiguous | 0.043 | Stabilizing | 0.982 | D | 0.499 | neutral | None | None | None | None | N |
R/M | 0.4775 | ambiguous | 0.4391 | ambiguous | -0.189 | Destabilizing | 1.0 | D | 0.552 | neutral | None | None | None | None | N |
R/N | 0.8543 | likely_pathogenic | 0.8056 | pathogenic | -0.113 | Destabilizing | 0.997 | D | 0.558 | neutral | None | None | None | None | N |
R/P | 0.9857 | likely_pathogenic | 0.9827 | pathogenic | -0.162 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
R/Q | 0.1542 | likely_benign | 0.1342 | benign | -0.349 | Destabilizing | 0.831 | D | 0.307 | neutral | None | None | None | None | N |
R/S | 0.8021 | likely_pathogenic | 0.7448 | pathogenic | -0.809 | Destabilizing | 0.976 | D | 0.609 | neutral | N | 0.460601001 | None | None | N |
R/T | 0.5578 | ambiguous | 0.4952 | ambiguous | -0.563 | Destabilizing | 0.997 | D | 0.526 | neutral | N | 0.489834526 | None | None | N |
R/V | 0.4986 | ambiguous | 0.4643 | ambiguous | -0.162 | Destabilizing | 0.997 | D | 0.826 | deleterious | None | None | None | None | N |
R/W | 0.2907 | likely_benign | 0.2751 | benign | -0.454 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
R/Y | 0.5551 | ambiguous | 0.4964 | ambiguous | -0.119 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.