Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26088 | 78487;78488;78489 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
N2AB | 24447 | 73564;73565;73566 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
N2A | 23520 | 70783;70784;70785 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
N2B | 17023 | 51292;51293;51294 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
Novex-1 | 17148 | 51667;51668;51669 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
Novex-2 | 17215 | 51868;51869;51870 | chr2:178567870;178567869;178567868 | chr2:179432597;179432596;179432595 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.734 | 0.472 | 0.495238560318 | gnomAD-4.0.0 | 2.05291E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1055 | likely_benign | 0.1377 | benign | -0.289 | Destabilizing | 0.991 | D | 0.681 | prob.neutral | N | 0.48778234 | None | None | I |
P/C | 0.6183 | likely_pathogenic | 0.7052 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
P/D | 0.6933 | likely_pathogenic | 0.7603 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.666 | prob.neutral | None | None | None | None | I |
P/E | 0.4519 | ambiguous | 0.5541 | ambiguous | -0.279 | Destabilizing | 0.987 | D | 0.743 | deleterious | None | None | None | None | I |
P/F | 0.6304 | likely_pathogenic | 0.7425 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
P/G | 0.5719 | likely_pathogenic | 0.6751 | pathogenic | -0.383 | Destabilizing | 0.999 | D | 0.724 | deleterious | None | None | None | None | I |
P/H | 0.3656 | ambiguous | 0.4543 | ambiguous | -0.004 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.517575749 | None | None | I |
P/I | 0.3346 | likely_benign | 0.4333 | ambiguous | -0.198 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/K | 0.5165 | ambiguous | 0.5924 | pathogenic | -0.23 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/L | 0.1614 | likely_benign | 0.2232 | benign | -0.198 | Destabilizing | 0.999 | D | 0.734 | deleterious | N | 0.484566336 | None | None | I |
P/M | 0.395 | ambiguous | 0.4963 | ambiguous | -0.309 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
P/N | 0.5366 | ambiguous | 0.6324 | pathogenic | 0.057 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
P/Q | 0.2582 | likely_benign | 0.3501 | ambiguous | -0.193 | Destabilizing | 0.969 | D | 0.516 | neutral | None | None | None | None | I |
P/R | 0.332 | likely_benign | 0.4044 | ambiguous | 0.246 | Stabilizing | 0.997 | D | 0.797 | deleterious | N | 0.489556766 | None | None | I |
P/S | 0.2182 | likely_benign | 0.2894 | benign | -0.286 | Destabilizing | 0.997 | D | 0.701 | prob.delet. | N | 0.487190136 | None | None | I |
P/T | 0.1719 | likely_benign | 0.2307 | benign | -0.313 | Destabilizing | 0.999 | D | 0.654 | prob.neutral | N | 0.516308302 | None | None | I |
P/V | 0.2398 | likely_benign | 0.3091 | benign | -0.195 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | I |
P/W | 0.8604 | likely_pathogenic | 0.9116 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
P/Y | 0.663 | likely_pathogenic | 0.7515 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.