Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2609 | 8050;8051;8052 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
N2AB | 2609 | 8050;8051;8052 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
N2A | 2609 | 8050;8051;8052 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
N2B | 2563 | 7912;7913;7914 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
Novex-1 | 2563 | 7912;7913;7914 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
Novex-2 | 2563 | 7912;7913;7914 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
Novex-3 | 2609 | 8050;8051;8052 | chr2:178773139;178773138;178773137 | chr2:179637866;179637865;179637864 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.425 | N | 0.279 | 0.179 | 0.241664281697 | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85719E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2197 | likely_benign | 0.2088 | benign | -0.516 | Destabilizing | 0.495 | N | 0.366 | neutral | None | None | None | None | I |
N/C | 0.2279 | likely_benign | 0.2107 | benign | 0.235 | Stabilizing | 0.995 | D | 0.421 | neutral | None | None | None | None | I |
N/D | 0.2095 | likely_benign | 0.1991 | benign | 0.142 | Stabilizing | 0.425 | N | 0.279 | neutral | N | 0.345786365 | None | None | I |
N/E | 0.2908 | likely_benign | 0.275 | benign | 0.177 | Stabilizing | 0.176 | N | 0.206 | neutral | None | None | None | None | I |
N/F | 0.4372 | ambiguous | 0.3999 | ambiguous | -0.501 | Destabilizing | 0.981 | D | 0.46 | neutral | None | None | None | None | I |
N/G | 0.406 | ambiguous | 0.3882 | ambiguous | -0.79 | Destabilizing | 0.495 | N | 0.265 | neutral | None | None | None | None | I |
N/H | 0.0807 | likely_benign | 0.075 | benign | -0.678 | Destabilizing | 0.927 | D | 0.35 | neutral | N | 0.443142171 | None | None | I |
N/I | 0.1759 | likely_benign | 0.1586 | benign | 0.143 | Stabilizing | 0.927 | D | 0.484 | neutral | N | 0.398928474 | None | None | I |
N/K | 0.1869 | likely_benign | 0.1764 | benign | -0.05 | Destabilizing | 0.001 | N | 0.073 | neutral | N | 0.339726353 | None | None | I |
N/L | 0.228 | likely_benign | 0.213 | benign | 0.143 | Stabilizing | 0.704 | D | 0.449 | neutral | None | None | None | None | I |
N/M | 0.2633 | likely_benign | 0.2412 | benign | 0.395 | Stabilizing | 0.981 | D | 0.431 | neutral | None | None | None | None | I |
N/P | 0.9407 | likely_pathogenic | 0.9415 | pathogenic | -0.047 | Destabilizing | 0.828 | D | 0.469 | neutral | None | None | None | None | I |
N/Q | 0.2169 | likely_benign | 0.2033 | benign | -0.46 | Destabilizing | 0.013 | N | 0.061 | neutral | None | None | None | None | I |
N/R | 0.2449 | likely_benign | 0.228 | benign | -0.108 | Destabilizing | 0.329 | N | 0.258 | neutral | None | None | None | None | I |
N/S | 0.1143 | likely_benign | 0.1078 | benign | -0.423 | Destabilizing | 0.425 | N | 0.291 | neutral | N | 0.40034829 | None | None | I |
N/T | 0.1238 | likely_benign | 0.1187 | benign | -0.213 | Destabilizing | 0.425 | N | 0.233 | neutral | N | 0.371621112 | None | None | I |
N/V | 0.1911 | likely_benign | 0.1742 | benign | -0.047 | Destabilizing | 0.828 | D | 0.456 | neutral | None | None | None | None | I |
N/W | 0.7141 | likely_pathogenic | 0.6894 | pathogenic | -0.363 | Destabilizing | 0.995 | D | 0.434 | neutral | None | None | None | None | I |
N/Y | 0.1056 | likely_benign | 0.0972 | benign | -0.141 | Destabilizing | 0.975 | D | 0.468 | neutral | N | 0.457475873 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.