Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26094 | 78505;78506;78507 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
N2AB | 24453 | 73582;73583;73584 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
N2A | 23526 | 70801;70802;70803 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
N2B | 17029 | 51310;51311;51312 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
Novex-1 | 17154 | 51685;51686;51687 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
Novex-2 | 17221 | 51886;51887;51888 | chr2:178567852;178567851;178567850 | chr2:179432579;179432578;179432577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.351 | N | 0.193 | 0.067 | 0.16115917748 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
T/S | None | None | 0.183 | N | 0.243 | 0.103 | 0.148003135375 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0774 | likely_benign | 0.076 | benign | -0.868 | Destabilizing | 0.047 | N | 0.16 | neutral | N | 0.454006036 | None | None | N |
T/C | 0.2062 | likely_benign | 0.1813 | benign | -0.574 | Destabilizing | 0.001 | N | 0.131 | neutral | None | None | None | None | N |
T/D | 0.4502 | ambiguous | 0.43 | ambiguous | -0.591 | Destabilizing | 0.418 | N | 0.277 | neutral | None | None | None | None | N |
T/E | 0.2654 | likely_benign | 0.2569 | benign | -0.627 | Destabilizing | 0.129 | N | 0.289 | neutral | None | None | None | None | N |
T/F | 0.2026 | likely_benign | 0.1963 | benign | -1.212 | Destabilizing | 0.836 | D | 0.334 | neutral | None | None | None | None | N |
T/G | 0.2807 | likely_benign | 0.2934 | benign | -1.062 | Destabilizing | 0.228 | N | 0.277 | neutral | None | None | None | None | N |
T/H | 0.1698 | likely_benign | 0.1682 | benign | -1.45 | Destabilizing | 0.836 | D | 0.304 | neutral | None | None | None | None | N |
T/I | 0.1016 | likely_benign | 0.0997 | benign | -0.45 | Destabilizing | 0.351 | N | 0.377 | neutral | N | 0.519614952 | None | None | N |
T/K | 0.0861 | likely_benign | 0.0838 | benign | -0.739 | Destabilizing | 0.129 | N | 0.297 | neutral | None | None | None | None | N |
T/L | 0.074 | likely_benign | 0.0732 | benign | -0.45 | Destabilizing | 0.129 | N | 0.293 | neutral | None | None | None | None | N |
T/M | 0.0771 | likely_benign | 0.0767 | benign | 0.028 | Stabilizing | 0.94 | D | 0.319 | neutral | None | None | None | None | N |
T/N | 0.1092 | likely_benign | 0.1114 | benign | -0.654 | Destabilizing | 0.351 | N | 0.193 | neutral | N | 0.437492214 | None | None | N |
T/P | 0.0983 | likely_benign | 0.1044 | benign | -0.56 | Destabilizing | 0.77 | D | 0.375 | neutral | N | 0.462414875 | None | None | N |
T/Q | 0.1214 | likely_benign | 0.1268 | benign | -0.968 | Destabilizing | 0.012 | N | 0.115 | neutral | None | None | None | None | N |
T/R | 0.0783 | likely_benign | 0.0839 | benign | -0.407 | Destabilizing | 0.001 | N | 0.109 | neutral | None | None | None | None | N |
T/S | 0.1231 | likely_benign | 0.1213 | benign | -0.874 | Destabilizing | 0.183 | N | 0.243 | neutral | N | 0.472842513 | None | None | N |
T/V | 0.0917 | likely_benign | 0.0928 | benign | -0.56 | Destabilizing | 0.129 | N | 0.174 | neutral | None | None | None | None | N |
T/W | 0.5413 | ambiguous | 0.5286 | ambiguous | -1.115 | Destabilizing | 0.983 | D | 0.293 | neutral | None | None | None | None | N |
T/Y | 0.2158 | likely_benign | 0.2014 | benign | -0.868 | Destabilizing | 0.94 | D | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.