Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26096 | 78511;78512;78513 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
N2AB | 24455 | 73588;73589;73590 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
N2A | 23528 | 70807;70808;70809 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
N2B | 17031 | 51316;51317;51318 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
Novex-1 | 17156 | 51691;51692;51693 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
Novex-2 | 17223 | 51892;51893;51894 | chr2:178567846;178567845;178567844 | chr2:179432573;179432572;179432571 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs370515843 | -0.354 | 0.959 | N | 0.419 | 0.238 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs370515843 | -0.354 | 0.959 | N | 0.419 | 0.238 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs370515843 | -0.354 | 0.959 | N | 0.419 | 0.238 | None | gnomAD-4.0.0 | 5.12656E-06 | None | None | None | None | N | None | 6.7714E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2116 | likely_benign | 0.2026 | benign | -0.688 | Destabilizing | 0.826 | D | 0.404 | neutral | N | 0.483129937 | None | None | N |
E/C | 0.7957 | likely_pathogenic | 0.7929 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
E/D | 0.191 | likely_benign | 0.2252 | benign | -0.88 | Destabilizing | 0.015 | N | 0.133 | neutral | N | 0.494904316 | None | None | N |
E/F | 0.6611 | likely_pathogenic | 0.6573 | pathogenic | -0.241 | Destabilizing | 0.982 | D | 0.597 | neutral | None | None | None | None | N |
E/G | 0.3309 | likely_benign | 0.3308 | benign | -1.01 | Destabilizing | 0.959 | D | 0.523 | neutral | N | 0.497550889 | None | None | N |
E/H | 0.4542 | ambiguous | 0.4607 | ambiguous | -0.418 | Destabilizing | 0.997 | D | 0.525 | neutral | None | None | None | None | N |
E/I | 0.1701 | likely_benign | 0.1577 | benign | 0.172 | Stabilizing | 0.884 | D | 0.519 | neutral | None | None | None | None | N |
E/K | 0.1454 | likely_benign | 0.1423 | benign | -0.362 | Destabilizing | 0.959 | D | 0.419 | neutral | N | 0.481517924 | None | None | N |
E/L | 0.3036 | likely_benign | 0.2955 | benign | 0.172 | Stabilizing | 0.759 | D | 0.432 | neutral | None | None | None | None | N |
E/M | 0.324 | likely_benign | 0.3053 | benign | 0.443 | Stabilizing | 0.579 | D | 0.341 | neutral | None | None | None | None | N |
E/N | 0.2679 | likely_benign | 0.2867 | benign | -0.767 | Destabilizing | 0.939 | D | 0.482 | neutral | None | None | None | None | N |
E/P | 0.9633 | likely_pathogenic | 0.9579 | pathogenic | -0.093 | Destabilizing | 0.997 | D | 0.584 | neutral | None | None | None | None | N |
E/Q | 0.1317 | likely_benign | 0.126 | benign | -0.664 | Destabilizing | 0.959 | D | 0.472 | neutral | N | 0.520807031 | None | None | N |
E/R | 0.2745 | likely_benign | 0.2621 | benign | -0.09 | Destabilizing | 0.991 | D | 0.531 | neutral | None | None | None | None | N |
E/S | 0.2497 | likely_benign | 0.2516 | benign | -1.015 | Destabilizing | 0.939 | D | 0.415 | neutral | None | None | None | None | N |
E/T | 0.1915 | likely_benign | 0.1859 | benign | -0.756 | Destabilizing | 0.939 | D | 0.469 | neutral | None | None | None | None | N |
E/V | 0.1112 | likely_benign | 0.101 | benign | -0.093 | Destabilizing | 0.061 | N | 0.313 | neutral | N | 0.504877573 | None | None | N |
E/W | 0.9078 | likely_pathogenic | 0.9085 | pathogenic | -0.015 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
E/Y | 0.5842 | likely_pathogenic | 0.5835 | pathogenic | 0.004 | Stabilizing | 0.997 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.