Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26101 | 78526;78527;78528 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
N2AB | 24460 | 73603;73604;73605 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
N2A | 23533 | 70822;70823;70824 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
N2B | 17036 | 51331;51332;51333 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
Novex-1 | 17161 | 51706;51707;51708 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
Novex-2 | 17228 | 51907;51908;51909 | chr2:178567831;178567830;178567829 | chr2:179432558;179432557;179432556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs749914062 | -0.597 | 0.007 | N | 0.115 | 0.144 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
K/T | rs749914062 | -0.597 | 0.007 | N | 0.115 | 0.144 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs749914062 | -0.597 | 0.007 | N | 0.115 | 0.144 | None | gnomAD-4.0.0 | 1.53786E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.3941E-05 | 0 | 5.69087E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4236 | ambiguous | 0.4394 | ambiguous | -0.587 | Destabilizing | 0.525 | D | 0.298 | neutral | None | None | None | None | N |
K/C | 0.6627 | likely_pathogenic | 0.6624 | pathogenic | -0.722 | Destabilizing | 0.998 | D | 0.332 | neutral | None | None | None | None | N |
K/D | 0.6869 | likely_pathogenic | 0.715 | pathogenic | -0.874 | Destabilizing | 0.842 | D | 0.272 | neutral | None | None | None | None | N |
K/E | 0.3331 | likely_benign | 0.3924 | ambiguous | -0.736 | Destabilizing | 0.625 | D | 0.247 | neutral | N | 0.416148576 | None | None | N |
K/F | 0.8506 | likely_pathogenic | 0.8735 | pathogenic | -0.129 | Destabilizing | 0.974 | D | 0.359 | neutral | None | None | None | None | N |
K/G | 0.3709 | ambiguous | 0.3829 | ambiguous | -0.996 | Destabilizing | 0.842 | D | 0.265 | neutral | None | None | None | None | N |
K/H | 0.333 | likely_benign | 0.338 | benign | -1.445 | Destabilizing | 0.991 | D | 0.319 | neutral | None | None | None | None | N |
K/I | 0.6421 | likely_pathogenic | 0.6925 | pathogenic | 0.494 | Stabilizing | 0.801 | D | 0.361 | neutral | N | 0.464673242 | None | None | N |
K/L | 0.4365 | ambiguous | 0.4718 | ambiguous | 0.494 | Stabilizing | 0.525 | D | 0.23 | neutral | None | None | None | None | N |
K/M | 0.2813 | likely_benign | 0.3017 | benign | 0.387 | Stabilizing | 0.991 | D | 0.323 | neutral | None | None | None | None | N |
K/N | 0.3915 | ambiguous | 0.4223 | ambiguous | -0.982 | Destabilizing | 0.801 | D | 0.205 | neutral | N | 0.398946895 | None | None | N |
K/P | 0.9437 | likely_pathogenic | 0.9499 | pathogenic | 0.164 | Stabilizing | 0.915 | D | 0.332 | neutral | None | None | None | None | N |
K/Q | 0.1667 | likely_benign | 0.1879 | benign | -0.976 | Destabilizing | 0.891 | D | 0.323 | neutral | N | 0.415591215 | None | None | N |
K/R | 0.0872 | likely_benign | 0.0894 | benign | -1.021 | Destabilizing | 0.891 | D | 0.219 | neutral | N | 0.396562737 | None | None | N |
K/S | 0.3441 | ambiguous | 0.3488 | ambiguous | -1.477 | Destabilizing | 0.525 | D | 0.285 | neutral | None | None | None | None | N |
K/T | 0.1197 | likely_benign | 0.1201 | benign | -1.132 | Destabilizing | 0.007 | N | 0.115 | neutral | N | 0.278193985 | None | None | N |
K/V | 0.5468 | ambiguous | 0.5827 | pathogenic | 0.164 | Stabilizing | 0.525 | D | 0.261 | neutral | None | None | None | None | N |
K/W | 0.8607 | likely_pathogenic | 0.8804 | pathogenic | -0.117 | Destabilizing | 0.998 | D | 0.357 | neutral | None | None | None | None | N |
K/Y | 0.7267 | likely_pathogenic | 0.757 | pathogenic | 0.203 | Stabilizing | 0.991 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.