Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26104 | 78535;78536;78537 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
N2AB | 24463 | 73612;73613;73614 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
N2A | 23536 | 70831;70832;70833 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
N2B | 17039 | 51340;51341;51342 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
Novex-1 | 17164 | 51715;51716;51717 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
Novex-2 | 17231 | 51916;51917;51918 | chr2:178567822;178567821;178567820 | chr2:179432549;179432548;179432547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.27 | N | 0.357 | 0.197 | 0.287603790349 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1028 | likely_benign | 0.1239 | benign | -0.808 | Destabilizing | 0.002 | N | 0.202 | neutral | N | 0.382492654 | None | None | N |
E/C | 0.5919 | likely_pathogenic | 0.6566 | pathogenic | -0.599 | Destabilizing | 0.995 | D | 0.624 | neutral | None | None | None | None | N |
E/D | 0.1489 | likely_benign | 0.1853 | benign | -1.468 | Destabilizing | 0.425 | N | 0.41 | neutral | N | 0.46247359 | None | None | N |
E/F | 0.6145 | likely_pathogenic | 0.6651 | pathogenic | -0.868 | Destabilizing | 0.981 | D | 0.643 | neutral | None | None | None | None | N |
E/G | 0.1746 | likely_benign | 0.2211 | benign | -1.159 | Destabilizing | 0.27 | N | 0.357 | neutral | N | 0.423955275 | None | None | N |
E/H | 0.3309 | likely_benign | 0.3984 | ambiguous | -1.197 | Destabilizing | 0.981 | D | 0.543 | neutral | None | None | None | None | N |
E/I | 0.3253 | likely_benign | 0.3902 | ambiguous | 0.143 | Stabilizing | 0.893 | D | 0.668 | neutral | None | None | None | None | N |
E/K | 0.2267 | likely_benign | 0.293 | benign | -0.91 | Destabilizing | 0.425 | N | 0.457 | neutral | N | 0.447600138 | None | None | N |
E/L | 0.369 | ambiguous | 0.446 | ambiguous | 0.143 | Stabilizing | 0.704 | D | 0.559 | neutral | None | None | None | None | N |
E/M | 0.3309 | likely_benign | 0.3787 | ambiguous | 0.646 | Stabilizing | 0.981 | D | 0.619 | neutral | None | None | None | None | N |
E/N | 0.196 | likely_benign | 0.2496 | benign | -1.162 | Destabilizing | 0.704 | D | 0.479 | neutral | None | None | None | None | N |
E/P | 0.9815 | likely_pathogenic | 0.9879 | pathogenic | -0.153 | Destabilizing | 0.828 | D | 0.591 | neutral | None | None | None | None | N |
E/Q | 0.123 | likely_benign | 0.1451 | benign | -1.017 | Destabilizing | 0.784 | D | 0.475 | neutral | N | 0.432150683 | None | None | N |
E/R | 0.3467 | ambiguous | 0.4253 | ambiguous | -0.859 | Destabilizing | 0.704 | D | 0.532 | neutral | None | None | None | None | N |
E/S | 0.1019 | likely_benign | 0.1254 | benign | -1.599 | Destabilizing | 0.004 | N | 0.119 | neutral | None | None | None | None | N |
E/T | 0.1258 | likely_benign | 0.1586 | benign | -1.297 | Destabilizing | 0.329 | N | 0.414 | neutral | None | None | None | None | N |
E/V | 0.2071 | likely_benign | 0.2413 | benign | -0.153 | Destabilizing | 0.473 | N | 0.527 | neutral | N | 0.443965187 | None | None | N |
E/W | 0.855 | likely_pathogenic | 0.8878 | pathogenic | -0.937 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | N |
E/Y | 0.471 | ambiguous | 0.522 | ambiguous | -0.677 | Destabilizing | 0.981 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.