Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26105 | 78538;78539;78540 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
N2AB | 24464 | 73615;73616;73617 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
N2A | 23537 | 70834;70835;70836 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
N2B | 17040 | 51343;51344;51345 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
Novex-1 | 17165 | 51718;51719;51720 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
Novex-2 | 17232 | 51919;51920;51921 | chr2:178567819;178567818;178567817 | chr2:179432546;179432545;179432544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.896 | N | 0.761 | 0.385 | 0.555867075214 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8926 | likely_pathogenic | 0.8907 | pathogenic | -2.958 | Highly Destabilizing | 0.702 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/C | 0.9208 | likely_pathogenic | 0.9169 | pathogenic | -2.298 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
I/D | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -3.453 | Highly Destabilizing | 0.996 | D | 0.83 | deleterious | None | None | None | None | N |
I/E | 0.9956 | likely_pathogenic | 0.9945 | pathogenic | -3.12 | Highly Destabilizing | 0.988 | D | 0.811 | deleterious | None | None | None | None | N |
I/F | 0.7457 | likely_pathogenic | 0.7478 | pathogenic | -1.697 | Destabilizing | 0.984 | D | 0.709 | prob.delet. | N | 0.471584778 | None | None | N |
I/G | 0.9886 | likely_pathogenic | 0.9875 | pathogenic | -3.591 | Highly Destabilizing | 0.988 | D | 0.791 | deleterious | None | None | None | None | N |
I/H | 0.9959 | likely_pathogenic | 0.9954 | pathogenic | -3.175 | Highly Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
I/K | 0.9935 | likely_pathogenic | 0.992 | pathogenic | -2.137 | Highly Destabilizing | 0.988 | D | 0.813 | deleterious | None | None | None | None | N |
I/L | 0.3831 | ambiguous | 0.3869 | ambiguous | -1.049 | Destabilizing | 0.437 | N | 0.407 | neutral | N | 0.463673164 | None | None | N |
I/M | 0.3216 | likely_benign | 0.3216 | benign | -1.363 | Destabilizing | 0.984 | D | 0.661 | neutral | N | 0.487168886 | None | None | N |
I/N | 0.9779 | likely_pathogenic | 0.9694 | pathogenic | -2.837 | Highly Destabilizing | 0.995 | D | 0.824 | deleterious | N | 0.499096782 | None | None | N |
I/P | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -1.677 | Destabilizing | 0.996 | D | 0.832 | deleterious | None | None | None | None | N |
I/Q | 0.9932 | likely_pathogenic | 0.9922 | pathogenic | -2.478 | Highly Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
I/R | 0.9897 | likely_pathogenic | 0.988 | pathogenic | -2.183 | Highly Destabilizing | 0.996 | D | 0.823 | deleterious | None | None | None | None | N |
I/S | 0.9603 | likely_pathogenic | 0.9512 | pathogenic | -3.467 | Highly Destabilizing | 0.984 | D | 0.783 | deleterious | N | 0.476130681 | None | None | N |
I/T | 0.91 | likely_pathogenic | 0.9019 | pathogenic | -2.96 | Highly Destabilizing | 0.896 | D | 0.761 | deleterious | N | 0.472091757 | None | None | N |
I/V | 0.0945 | likely_benign | 0.0968 | benign | -1.677 | Destabilizing | 0.004 | N | 0.181 | neutral | N | 0.347344639 | None | None | N |
I/W | 0.9952 | likely_pathogenic | 0.9957 | pathogenic | -2.035 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
I/Y | 0.9727 | likely_pathogenic | 0.9705 | pathogenic | -1.871 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.