Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26106 | 78541;78542;78543 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
N2AB | 24465 | 73618;73619;73620 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
N2A | 23538 | 70837;70838;70839 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
N2B | 17041 | 51346;51347;51348 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
Novex-1 | 17166 | 51721;51722;51723 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
Novex-2 | 17233 | 51922;51923;51924 | chr2:178567816;178567815;178567814 | chr2:179432543;179432542;179432541 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1706489546 | None | 0.852 | N | 0.463 | 0.282 | 0.460352466543 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1706489546 | None | 0.852 | N | 0.463 | 0.282 | 0.460352466543 | gnomAD-4.0.0 | 5.07504E-06 | None | None | None | None | N | None | 1.74734E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.81985E-06 | 0 | 0 |
T/S | rs768440075 | -1.432 | 0.92 | N | 0.499 | 0.193 | 0.223847106136 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1277 | likely_benign | 0.1269 | benign | -0.976 | Destabilizing | 0.826 | D | 0.447 | neutral | N | 0.521868611 | None | None | N |
T/C | 0.42 | ambiguous | 0.4226 | ambiguous | -0.875 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
T/D | 0.6039 | likely_pathogenic | 0.5826 | pathogenic | -1.63 | Destabilizing | 0.969 | D | 0.524 | neutral | None | None | None | None | N |
T/E | 0.482 | ambiguous | 0.4561 | ambiguous | -1.473 | Destabilizing | 0.939 | D | 0.468 | neutral | None | None | None | None | N |
T/F | 0.3178 | likely_benign | 0.3054 | benign | -0.494 | Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
T/G | 0.4481 | ambiguous | 0.4306 | ambiguous | -1.363 | Destabilizing | 0.969 | D | 0.509 | neutral | None | None | None | None | N |
T/H | 0.3032 | likely_benign | 0.3028 | benign | -1.563 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
T/I | 0.1642 | likely_benign | 0.1669 | benign | 0.023 | Stabilizing | 0.852 | D | 0.463 | neutral | N | 0.482626639 | None | None | N |
T/K | 0.2969 | likely_benign | 0.3077 | benign | -0.941 | Destabilizing | 0.079 | N | 0.259 | neutral | None | None | None | None | N |
T/L | 0.1279 | likely_benign | 0.1283 | benign | 0.023 | Stabilizing | 0.759 | D | 0.449 | neutral | None | None | None | None | N |
T/M | 0.1027 | likely_benign | 0.1022 | benign | -0.022 | Destabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | N |
T/N | 0.1867 | likely_benign | 0.1879 | benign | -1.449 | Destabilizing | 0.959 | D | 0.517 | neutral | N | 0.47867662 | None | None | N |
T/P | 0.7133 | likely_pathogenic | 0.7135 | pathogenic | -0.278 | Destabilizing | 0.996 | D | 0.565 | neutral | N | 0.519684523 | None | None | N |
T/Q | 0.2916 | likely_benign | 0.2917 | benign | -1.285 | Destabilizing | 0.982 | D | 0.563 | neutral | None | None | None | None | N |
T/R | 0.2583 | likely_benign | 0.2585 | benign | -1.033 | Destabilizing | 0.884 | D | 0.494 | neutral | None | None | None | None | N |
T/S | 0.1311 | likely_benign | 0.1239 | benign | -1.578 | Destabilizing | 0.92 | D | 0.499 | neutral | N | 0.479539199 | None | None | N |
T/V | 0.1429 | likely_benign | 0.1447 | benign | -0.278 | Destabilizing | 0.17 | N | 0.239 | neutral | None | None | None | None | N |
T/W | 0.6945 | likely_pathogenic | 0.6872 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
T/Y | 0.3494 | ambiguous | 0.3445 | ambiguous | -0.351 | Destabilizing | 0.997 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.