Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26107 | 78544;78545;78546 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
N2AB | 24466 | 73621;73622;73623 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
N2A | 23539 | 70840;70841;70842 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
N2B | 17042 | 51349;51350;51351 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
Novex-1 | 17167 | 51724;51725;51726 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
Novex-2 | 17234 | 51925;51926;51927 | chr2:178567813;178567812;178567811 | chr2:179432540;179432539;179432538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs2154166544 | None | 1.0 | D | 0.892 | 0.612 | 0.854974579623 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9702 | likely_pathogenic | 0.9578 | pathogenic | -2.862 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/C | 0.9386 | likely_pathogenic | 0.9217 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.38 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
L/E | 0.9984 | likely_pathogenic | 0.9973 | pathogenic | -3.065 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.8257 | likely_pathogenic | 0.7467 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.516962271 | None | None | N |
L/G | 0.996 | likely_pathogenic | 0.9949 | pathogenic | -3.429 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/H | 0.9968 | likely_pathogenic | 0.9943 | pathogenic | -3.086 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/I | 0.1228 | likely_benign | 0.0942 | benign | -1.128 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.501586552 | None | None | N |
L/K | 0.9976 | likely_pathogenic | 0.9963 | pathogenic | -2.073 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/M | 0.3958 | ambiguous | 0.3027 | benign | -1.339 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9973 | pathogenic | -2.793 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/P | 0.9983 | likely_pathogenic | 0.9974 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/Q | 0.9944 | likely_pathogenic | 0.9907 | pathogenic | -2.417 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/R | 0.9949 | likely_pathogenic | 0.9921 | pathogenic | -2.183 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/S | 0.9956 | likely_pathogenic | 0.993 | pathogenic | -3.239 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.55608407 | None | None | N |
L/T | 0.9736 | likely_pathogenic | 0.9624 | pathogenic | -2.773 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/V | 0.1673 | likely_benign | 0.134 | benign | -1.702 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.519649451 | None | None | N |
L/W | 0.9921 | likely_pathogenic | 0.9851 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/Y | 0.9908 | likely_pathogenic | 0.9848 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.