Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26110 | 78553;78554;78555 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
N2AB | 24469 | 73630;73631;73632 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
N2A | 23542 | 70849;70850;70851 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
N2B | 17045 | 51358;51359;51360 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
Novex-1 | 17170 | 51733;51734;51735 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
Novex-2 | 17237 | 51934;51935;51936 | chr2:178567804;178567803;178567802 | chr2:179432531;179432530;179432529 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.997 | N | 0.748 | 0.477 | 0.519783508757 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0819 | likely_benign | 0.087 | benign | -0.773 | Destabilizing | 0.977 | D | 0.423 | neutral | N | 0.491257702 | None | None | N |
T/C | 0.4253 | ambiguous | 0.4305 | ambiguous | -0.522 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/D | 0.3012 | likely_benign | 0.3075 | benign | -0.097 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/E | 0.2069 | likely_benign | 0.199 | benign | -0.072 | Destabilizing | 0.966 | D | 0.644 | neutral | None | None | None | None | N |
T/F | 0.3841 | ambiguous | 0.376 | ambiguous | -0.816 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
T/G | 0.2122 | likely_benign | 0.2233 | benign | -1.052 | Destabilizing | 0.995 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/H | 0.2272 | likely_benign | 0.2284 | benign | -1.292 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/I | 0.2624 | likely_benign | 0.2765 | benign | -0.117 | Destabilizing | 0.997 | D | 0.749 | deleterious | N | 0.503360208 | None | None | N |
T/K | 0.1085 | likely_benign | 0.1101 | benign | -0.676 | Destabilizing | 0.289 | N | 0.281 | neutral | None | None | None | None | N |
T/L | 0.1234 | likely_benign | 0.1263 | benign | -0.117 | Destabilizing | 0.983 | D | 0.591 | neutral | None | None | None | None | N |
T/M | 0.104 | likely_benign | 0.1046 | benign | -0.006 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/N | 0.107 | likely_benign | 0.1111 | benign | -0.7 | Destabilizing | 0.993 | D | 0.588 | neutral | D | 0.525484919 | None | None | N |
T/P | 0.2695 | likely_benign | 0.2761 | benign | -0.302 | Destabilizing | 0.997 | D | 0.748 | deleterious | N | 0.48560238 | None | None | N |
T/Q | 0.1374 | likely_benign | 0.1345 | benign | -0.761 | Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
T/R | 0.1193 | likely_benign | 0.1177 | benign | -0.523 | Destabilizing | 0.99 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/S | 0.0992 | likely_benign | 0.1039 | benign | -0.977 | Destabilizing | 0.977 | D | 0.385 | neutral | N | 0.4528326 | None | None | N |
T/V | 0.1823 | likely_benign | 0.1955 | benign | -0.302 | Destabilizing | 0.991 | D | 0.485 | neutral | None | None | None | None | N |
T/W | 0.7072 | likely_pathogenic | 0.6976 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
T/Y | 0.3694 | ambiguous | 0.3648 | ambiguous | -0.538 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.