Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26120 | 78583;78584;78585 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
N2AB | 24479 | 73660;73661;73662 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
N2A | 23552 | 70879;70880;70881 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
N2B | 17055 | 51388;51389;51390 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
Novex-1 | 17180 | 51763;51764;51765 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
Novex-2 | 17247 | 51964;51965;51966 | chr2:178567774;178567773;178567772 | chr2:179432501;179432500;179432499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.994 | D | 0.669 | 0.427 | 0.684186827415 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9732 | likely_pathogenic | 0.9674 | pathogenic | -2.21 | Highly Destabilizing | 0.931 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/C | 0.9803 | likely_pathogenic | 0.973 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
I/D | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -2.304 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | I |
I/E | 0.9938 | likely_pathogenic | 0.9928 | pathogenic | -2.248 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | I |
I/F | 0.9137 | likely_pathogenic | 0.8986 | pathogenic | -1.644 | Destabilizing | 0.994 | D | 0.669 | neutral | D | 0.533424366 | None | None | I |
I/G | 0.9955 | likely_pathogenic | 0.9943 | pathogenic | -2.606 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | I |
I/H | 0.9947 | likely_pathogenic | 0.9927 | pathogenic | -1.946 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
I/K | 0.9856 | likely_pathogenic | 0.9838 | pathogenic | -1.569 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
I/L | 0.3897 | ambiguous | 0.3511 | ambiguous | -1.141 | Destabilizing | 0.689 | D | 0.469 | neutral | N | 0.508846172 | None | None | I |
I/M | 0.5685 | likely_pathogenic | 0.5149 | ambiguous | -0.798 | Destabilizing | 0.994 | D | 0.652 | neutral | D | 0.535959261 | None | None | I |
I/N | 0.9342 | likely_pathogenic | 0.9196 | pathogenic | -1.518 | Destabilizing | 0.998 | D | 0.861 | deleterious | D | 0.523148152 | None | None | I |
I/P | 0.9717 | likely_pathogenic | 0.9686 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | I |
I/Q | 0.9903 | likely_pathogenic | 0.9883 | pathogenic | -1.665 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | I |
I/R | 0.9824 | likely_pathogenic | 0.9796 | pathogenic | -0.978 | Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | I |
I/S | 0.9784 | likely_pathogenic | 0.9755 | pathogenic | -2.126 | Highly Destabilizing | 0.994 | D | 0.831 | deleterious | D | 0.524856445 | None | None | I |
I/T | 0.9483 | likely_pathogenic | 0.9386 | pathogenic | -1.95 | Destabilizing | 0.961 | D | 0.753 | deleterious | N | 0.520083505 | None | None | I |
I/V | 0.1108 | likely_benign | 0.1059 | benign | -1.471 | Destabilizing | 0.122 | N | 0.253 | neutral | N | 0.4705385 | None | None | I |
I/W | 0.9982 | likely_pathogenic | 0.9971 | pathogenic | -1.864 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
I/Y | 0.9873 | likely_pathogenic | 0.9844 | pathogenic | -1.628 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.