Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26124 | 78595;78596;78597 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
N2AB | 24483 | 73672;73673;73674 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
N2A | 23556 | 70891;70892;70893 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
N2B | 17059 | 51400;51401;51402 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
Novex-1 | 17184 | 51775;51776;51777 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
Novex-2 | 17251 | 51976;51977;51978 | chr2:178567762;178567761;178567760 | chr2:179432489;179432488;179432487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.437 | D | 0.461 | 0.174 | 0.474954162714 | gnomAD-4.0.0 | 6.84357E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99611E-07 | 0 | 0 |
I/M | None | None | 0.984 | N | 0.769 | 0.33 | 0.532359089423 | gnomAD-4.0.0 | 2.05312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69891E-06 | 0 | 0 |
I/N | rs778290450 | -2.639 | 0.995 | N | 0.795 | 0.479 | 0.767080534469 | gnomAD-2.1.1 | 7.51E-05 | None | None | None | None | N | None | 0 | 1.69904E-04 | None | 5.81283E-04 | 0 | None | 0 | None | 0 | 5.48E-05 | 2.81452E-04 |
I/N | rs778290450 | -2.639 | 0.995 | N | 0.795 | 0.479 | 0.767080534469 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 2.41E-05 | 1.31148E-04 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/N | rs778290450 | -2.639 | 0.995 | N | 0.795 | 0.479 | 0.767080534469 | gnomAD-4.0.0 | 2.29342E-05 | None | None | None | None | N | None | 1.33533E-05 | 1.5011E-04 | None | 3.04218E-04 | 0 | None | 0 | 0 | 1.18688E-05 | 0 | 6.40615E-05 |
I/T | rs778290450 | -2.803 | 0.896 | N | 0.768 | 0.212 | 0.610115391599 | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | N | None | 0 | 1.1327E-04 | None | 0 | 5.14E-05 | None | 0 | None | 0 | 2.35E-05 | 0 |
I/T | rs778290450 | -2.803 | 0.896 | N | 0.768 | 0.212 | 0.610115391599 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93274E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs778290450 | -2.803 | 0.896 | N | 0.768 | 0.212 | 0.610115391599 | gnomAD-4.0.0 | 8.05796E-06 | None | None | None | None | N | None | 0 | 6.67156E-05 | None | 0 | 2.23075E-05 | None | 0 | 0 | 6.78219E-06 | 0 | 0 |
I/V | rs397517713 | None | 0.004 | N | 0.232 | 0.069 | 0.385084120042 | gnomAD-4.0.0 | 2.73743E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59844E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4132 | ambiguous | 0.3333 | benign | -2.473 | Highly Destabilizing | 0.702 | D | 0.749 | deleterious | None | None | None | None | N |
I/C | 0.7388 | likely_pathogenic | 0.7029 | pathogenic | -1.873 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.8902 | likely_pathogenic | 0.856 | pathogenic | -2.533 | Highly Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
I/E | 0.8219 | likely_pathogenic | 0.7868 | pathogenic | -2.383 | Highly Destabilizing | 0.988 | D | 0.789 | deleterious | None | None | None | None | N |
I/F | 0.1992 | likely_benign | 0.1796 | benign | -1.522 | Destabilizing | 0.984 | D | 0.769 | deleterious | N | 0.471595821 | None | None | N |
I/G | 0.8436 | likely_pathogenic | 0.7921 | pathogenic | -2.948 | Highly Destabilizing | 0.988 | D | 0.775 | deleterious | None | None | None | None | N |
I/H | 0.6328 | likely_pathogenic | 0.5723 | pathogenic | -2.231 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
I/K | 0.7334 | likely_pathogenic | 0.6935 | pathogenic | -1.928 | Destabilizing | 0.988 | D | 0.789 | deleterious | None | None | None | None | N |
I/L | 0.1385 | likely_benign | 0.1325 | benign | -1.141 | Destabilizing | 0.437 | N | 0.461 | neutral | D | 0.522692543 | None | None | N |
I/M | 0.1088 | likely_benign | 0.0968 | benign | -1.105 | Destabilizing | 0.984 | D | 0.769 | deleterious | N | 0.492929306 | None | None | N |
I/N | 0.4197 | ambiguous | 0.3404 | ambiguous | -2.078 | Highly Destabilizing | 0.995 | D | 0.795 | deleterious | N | 0.466035959 | None | None | N |
I/P | 0.9896 | likely_pathogenic | 0.9818 | pathogenic | -1.562 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
I/Q | 0.6638 | likely_pathogenic | 0.6129 | pathogenic | -2.076 | Highly Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
I/R | 0.6285 | likely_pathogenic | 0.5726 | pathogenic | -1.46 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
I/S | 0.3612 | ambiguous | 0.2886 | benign | -2.779 | Highly Destabilizing | 0.984 | D | 0.755 | deleterious | N | 0.47546648 | None | None | N |
I/T | 0.1456 | likely_benign | 0.1099 | benign | -2.497 | Highly Destabilizing | 0.896 | D | 0.768 | deleterious | N | 0.479517769 | None | None | N |
I/V | 0.067 | likely_benign | 0.0692 | benign | -1.562 | Destabilizing | 0.004 | N | 0.232 | neutral | N | 0.455968905 | None | None | N |
I/W | 0.8026 | likely_pathogenic | 0.7804 | pathogenic | -1.789 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
I/Y | 0.5845 | likely_pathogenic | 0.5326 | ambiguous | -1.545 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.