Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26126 | 78601;78602;78603 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
N2AB | 24485 | 73678;73679;73680 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
N2A | 23558 | 70897;70898;70899 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
N2B | 17061 | 51406;51407;51408 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
Novex-1 | 17186 | 51781;51782;51783 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
Novex-2 | 17253 | 51982;51983;51984 | chr2:178567756;178567755;178567754 | chr2:179432483;179432482;179432481 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1325081624 | -1.65 | 1.0 | N | 0.747 | 0.363 | 0.277730125212 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1325081624 | -1.65 | 1.0 | N | 0.747 | 0.363 | 0.277730125212 | gnomAD-4.0.0 | 1.59236E-06 | None | None | None | None | N | None | 0 | 2.2877E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9627 | likely_pathogenic | 0.9615 | pathogenic | -1.815 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | D | 0.556751952 | None | None | N |
E/C | 0.9932 | likely_pathogenic | 0.9927 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/D | 0.9723 | likely_pathogenic | 0.974 | pathogenic | -1.912 | Destabilizing | 0.999 | D | 0.668 | neutral | N | 0.497590569 | None | None | N |
E/F | 0.9971 | likely_pathogenic | 0.9971 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/G | 0.9703 | likely_pathogenic | 0.97 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.540422124 | None | None | N |
E/H | 0.9931 | likely_pathogenic | 0.9932 | pathogenic | -1.35 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/I | 0.9904 | likely_pathogenic | 0.9896 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
E/K | 0.9777 | likely_pathogenic | 0.9765 | pathogenic | -1.806 | Destabilizing | 0.999 | D | 0.67 | neutral | D | 0.53260731 | None | None | N |
E/L | 0.9893 | likely_pathogenic | 0.9889 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/M | 0.9859 | likely_pathogenic | 0.985 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/N | 0.9942 | likely_pathogenic | 0.9944 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.839 | likely_pathogenic | 0.8412 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.479104239 | None | None | N |
E/R | 0.9834 | likely_pathogenic | 0.9821 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/S | 0.9712 | likely_pathogenic | 0.971 | pathogenic | -2.613 | Highly Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/T | 0.9876 | likely_pathogenic | 0.9878 | pathogenic | -2.257 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.9772 | likely_pathogenic | 0.9751 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.534635226 | None | None | N |
E/W | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/Y | 0.9943 | likely_pathogenic | 0.9943 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.