Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26142 | 78649;78650;78651 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
N2AB | 24501 | 73726;73727;73728 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
N2A | 23574 | 70945;70946;70947 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
N2B | 17077 | 51454;51455;51456 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
Novex-1 | 17202 | 51829;51830;51831 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
Novex-2 | 17269 | 52030;52031;52032 | chr2:178567708;178567707;178567706 | chr2:179432435;179432434;179432433 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs775124678 | -0.149 | 0.919 | N | 0.494 | 0.396 | 0.267755039894 | gnomAD-4.0.0 | 4.78722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30231E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5616 | ambiguous | 0.5765 | pathogenic | -0.68 | Destabilizing | 0.938 | D | 0.57 | neutral | None | None | None | None | N |
N/C | 0.7189 | likely_pathogenic | 0.6931 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
N/D | 0.5845 | likely_pathogenic | 0.5883 | pathogenic | 0.066 | Stabilizing | 0.958 | D | 0.427 | neutral | N | 0.517153437 | None | None | N |
N/E | 0.9125 | likely_pathogenic | 0.9119 | pathogenic | 0.075 | Stabilizing | 0.968 | D | 0.547 | neutral | None | None | None | None | N |
N/F | 0.9261 | likely_pathogenic | 0.9131 | pathogenic | -0.812 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
N/G | 0.6473 | likely_pathogenic | 0.6531 | pathogenic | -0.914 | Destabilizing | 0.938 | D | 0.447 | neutral | None | None | None | None | N |
N/H | 0.3782 | ambiguous | 0.3713 | ambiguous | -0.855 | Destabilizing | 0.998 | D | 0.654 | neutral | N | 0.516500076 | None | None | N |
N/I | 0.6405 | likely_pathogenic | 0.6188 | pathogenic | -0.129 | Destabilizing | 0.994 | D | 0.822 | deleterious | N | 0.500338545 | None | None | N |
N/K | 0.8914 | likely_pathogenic | 0.8935 | pathogenic | 0.014 | Stabilizing | 0.958 | D | 0.55 | neutral | N | 0.501221193 | None | None | N |
N/L | 0.5741 | likely_pathogenic | 0.5691 | pathogenic | -0.129 | Destabilizing | 0.991 | D | 0.757 | deleterious | None | None | None | None | N |
N/M | 0.6766 | likely_pathogenic | 0.6593 | pathogenic | 0.368 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/P | 0.788 | likely_pathogenic | 0.7839 | pathogenic | -0.285 | Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | N |
N/Q | 0.8227 | likely_pathogenic | 0.8257 | pathogenic | -0.562 | Destabilizing | 0.991 | D | 0.666 | neutral | None | None | None | None | N |
N/R | 0.8792 | likely_pathogenic | 0.8757 | pathogenic | 0.035 | Stabilizing | 0.991 | D | 0.652 | neutral | None | None | None | None | N |
N/S | 0.1542 | likely_benign | 0.1578 | benign | -0.43 | Destabilizing | 0.234 | N | 0.256 | neutral | N | 0.510187392 | None | None | N |
N/T | 0.3381 | likely_benign | 0.3483 | ambiguous | -0.25 | Destabilizing | 0.919 | D | 0.494 | neutral | N | 0.496759522 | None | None | N |
N/V | 0.5325 | ambiguous | 0.5204 | ambiguous | -0.285 | Destabilizing | 0.991 | D | 0.806 | deleterious | None | None | None | None | N |
N/W | 0.9687 | likely_pathogenic | 0.9619 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
N/Y | 0.5662 | likely_pathogenic | 0.5308 | ambiguous | -0.416 | Destabilizing | 0.998 | D | 0.794 | deleterious | N | 0.491816897 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.