Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26143 | 78652;78653;78654 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
N2AB | 24502 | 73729;73730;73731 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
N2A | 23575 | 70948;70949;70950 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
N2B | 17078 | 51457;51458;51459 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
Novex-1 | 17203 | 51832;51833;51834 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
Novex-2 | 17270 | 52033;52034;52035 | chr2:178567705;178567704;178567703 | chr2:179432432;179432431;179432430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.006 | N | 0.208 | 0.12 | 0.340510301474 | gnomAD-4.0.0 | 1.59627E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88693E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9016 | likely_pathogenic | 0.8859 | pathogenic | -1.356 | Destabilizing | 0.656 | D | 0.53 | neutral | N | 0.483521557 | None | None | N |
V/C | 0.954 | likely_pathogenic | 0.9432 | pathogenic | -0.885 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/D | 0.9887 | likely_pathogenic | 0.9857 | pathogenic | -1.102 | Destabilizing | 0.99 | D | 0.792 | deleterious | N | 0.495509746 | None | None | N |
V/E | 0.9676 | likely_pathogenic | 0.9607 | pathogenic | -0.888 | Destabilizing | 0.993 | D | 0.736 | prob.delet. | None | None | None | None | N |
V/F | 0.858 | likely_pathogenic | 0.8199 | pathogenic | -0.684 | Destabilizing | 0.942 | D | 0.695 | prob.neutral | N | 0.500197462 | None | None | N |
V/G | 0.9487 | likely_pathogenic | 0.9366 | pathogenic | -1.884 | Destabilizing | 0.97 | D | 0.765 | deleterious | N | 0.52165518 | None | None | N |
V/H | 0.9887 | likely_pathogenic | 0.9854 | pathogenic | -1.658 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.0703 | likely_benign | 0.0661 | benign | 0.091 | Stabilizing | 0.006 | N | 0.208 | neutral | N | 0.457259772 | None | None | N |
V/K | 0.9729 | likely_pathogenic | 0.9677 | pathogenic | -0.782 | Destabilizing | 0.978 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/L | 0.648 | likely_pathogenic | 0.5909 | pathogenic | 0.091 | Stabilizing | 0.125 | N | 0.407 | neutral | D | 0.522713973 | None | None | N |
V/M | 0.6213 | likely_pathogenic | 0.5591 | ambiguous | -0.082 | Destabilizing | 0.956 | D | 0.647 | neutral | None | None | None | None | N |
V/N | 0.946 | likely_pathogenic | 0.9349 | pathogenic | -1.019 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
V/P | 0.9898 | likely_pathogenic | 0.9875 | pathogenic | -0.361 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Q | 0.9649 | likely_pathogenic | 0.9573 | pathogenic | -0.809 | Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
V/R | 0.9653 | likely_pathogenic | 0.9582 | pathogenic | -0.87 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | N |
V/S | 0.9414 | likely_pathogenic | 0.9313 | pathogenic | -1.744 | Destabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/T | 0.8778 | likely_pathogenic | 0.8596 | pathogenic | -1.369 | Destabilizing | 0.86 | D | 0.607 | neutral | None | None | None | None | N |
V/W | 0.9968 | likely_pathogenic | 0.9952 | pathogenic | -1.116 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
V/Y | 0.9819 | likely_pathogenic | 0.9759 | pathogenic | -0.657 | Destabilizing | 0.978 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.