Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26145 | 78658;78659;78660 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
N2AB | 24504 | 73735;73736;73737 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
N2A | 23577 | 70954;70955;70956 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
N2B | 17080 | 51463;51464;51465 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
Novex-1 | 17205 | 51838;51839;51840 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
Novex-2 | 17272 | 52039;52040;52041 | chr2:178567699;178567698;178567697 | chr2:179432426;179432425;179432424 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1405668603 | 0.413 | 0.939 | N | 0.487 | 0.32 | 0.303781844768 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3707 | ambiguous | 0.3595 | ambiguous | -0.227 | Destabilizing | 0.939 | D | 0.56 | neutral | N | 0.48040599 | None | None | I |
E/C | 0.9597 | likely_pathogenic | 0.9533 | pathogenic | -0.374 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
E/D | 0.1021 | likely_benign | 0.1006 | benign | -0.488 | Destabilizing | 0.02 | N | 0.135 | neutral | N | 0.41712809 | None | None | I |
E/F | 0.9618 | likely_pathogenic | 0.9527 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
E/G | 0.3186 | likely_benign | 0.3037 | benign | -0.463 | Destabilizing | 0.939 | D | 0.507 | neutral | N | 0.503938998 | None | None | I |
E/H | 0.7702 | likely_pathogenic | 0.758 | pathogenic | 0.641 | Stabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | I |
E/I | 0.8689 | likely_pathogenic | 0.8566 | pathogenic | 0.373 | Stabilizing | 0.993 | D | 0.646 | neutral | None | None | None | None | I |
E/K | 0.4644 | ambiguous | 0.4709 | ambiguous | 0.237 | Stabilizing | 0.939 | D | 0.487 | neutral | N | 0.496548879 | None | None | I |
E/L | 0.8347 | likely_pathogenic | 0.8152 | pathogenic | 0.373 | Stabilizing | 0.993 | D | 0.639 | neutral | None | None | None | None | I |
E/M | 0.847 | likely_pathogenic | 0.8265 | pathogenic | 0.161 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
E/N | 0.3436 | ambiguous | 0.3319 | benign | -0.343 | Destabilizing | 0.973 | D | 0.566 | neutral | None | None | None | None | I |
E/P | 0.9622 | likely_pathogenic | 0.9636 | pathogenic | 0.193 | Stabilizing | 0.993 | D | 0.655 | neutral | None | None | None | None | I |
E/Q | 0.3349 | likely_benign | 0.3305 | benign | -0.248 | Destabilizing | 0.991 | D | 0.555 | neutral | N | 0.503090849 | None | None | I |
E/R | 0.6672 | likely_pathogenic | 0.6637 | pathogenic | 0.65 | Stabilizing | 0.993 | D | 0.614 | neutral | None | None | None | None | I |
E/S | 0.3521 | ambiguous | 0.3339 | benign | -0.481 | Destabilizing | 0.953 | D | 0.495 | neutral | None | None | None | None | I |
E/T | 0.4907 | ambiguous | 0.4824 | ambiguous | -0.273 | Destabilizing | 0.993 | D | 0.604 | neutral | None | None | None | None | I |
E/V | 0.6881 | likely_pathogenic | 0.6713 | pathogenic | 0.193 | Stabilizing | 0.991 | D | 0.616 | neutral | N | 0.509440818 | None | None | I |
E/W | 0.9881 | likely_pathogenic | 0.9856 | pathogenic | 0.379 | Stabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
E/Y | 0.9114 | likely_pathogenic | 0.8982 | pathogenic | 0.444 | Stabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.