Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26148 | 78667;78668;78669 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
N2AB | 24507 | 73744;73745;73746 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
N2A | 23580 | 70963;70964;70965 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
N2B | 17083 | 51472;51473;51474 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
Novex-1 | 17208 | 51847;51848;51849 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
Novex-2 | 17275 | 52048;52049;52050 | chr2:178567690;178567689;178567688 | chr2:179432417;179432416;179432415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs956398655 | None | 0.999 | N | 0.747 | 0.466 | 0.685023438539 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/C | rs956398655 | None | 0.999 | N | 0.747 | 0.466 | 0.685023438539 | gnomAD-4.0.0 | 5.13554E-06 | None | None | None | None | N | None | 1.69285E-05 | 0 | None | 0 | 0 | None | 0 | 2.24417E-04 | 4.79922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9896 | likely_pathogenic | 0.9895 | pathogenic | -2.179 | Highly Destabilizing | 0.916 | D | 0.581 | neutral | None | None | None | None | N |
F/C | 0.9044 | likely_pathogenic | 0.8915 | pathogenic | -1.385 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.504744287 | None | None | N |
F/D | 0.9974 | likely_pathogenic | 0.997 | pathogenic | -1.264 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
F/E | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -1.112 | Destabilizing | 0.987 | D | 0.759 | deleterious | None | None | None | None | N |
F/G | 0.9938 | likely_pathogenic | 0.9932 | pathogenic | -2.571 | Highly Destabilizing | 0.987 | D | 0.711 | prob.delet. | None | None | None | None | N |
F/H | 0.9499 | likely_pathogenic | 0.9478 | pathogenic | -0.817 | Destabilizing | 0.975 | D | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.938 | likely_pathogenic | 0.9367 | pathogenic | -0.966 | Destabilizing | 0.967 | D | 0.575 | neutral | N | 0.477053551 | None | None | N |
F/K | 0.9962 | likely_pathogenic | 0.9962 | pathogenic | -1.517 | Destabilizing | 0.987 | D | 0.763 | deleterious | None | None | None | None | N |
F/L | 0.9925 | likely_pathogenic | 0.9921 | pathogenic | -0.966 | Destabilizing | 0.805 | D | 0.455 | neutral | N | 0.508051164 | None | None | N |
F/M | 0.9453 | likely_pathogenic | 0.9415 | pathogenic | -0.767 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
F/N | 0.9876 | likely_pathogenic | 0.9858 | pathogenic | -1.793 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -1.369 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
F/Q | 0.9918 | likely_pathogenic | 0.9916 | pathogenic | -1.745 | Destabilizing | 0.987 | D | 0.785 | deleterious | None | None | None | None | N |
F/R | 0.9906 | likely_pathogenic | 0.9905 | pathogenic | -0.995 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | N |
F/S | 0.986 | likely_pathogenic | 0.9844 | pathogenic | -2.589 | Highly Destabilizing | 0.983 | D | 0.704 | prob.neutral | N | 0.499730163 | None | None | N |
F/T | 0.9916 | likely_pathogenic | 0.9909 | pathogenic | -2.332 | Highly Destabilizing | 0.987 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/V | 0.9188 | likely_pathogenic | 0.9152 | pathogenic | -1.369 | Destabilizing | 0.892 | D | 0.564 | neutral | N | 0.465551752 | None | None | N |
F/W | 0.8696 | likely_pathogenic | 0.8602 | pathogenic | 0.007 | Stabilizing | 0.997 | D | 0.61 | neutral | None | None | None | None | N |
F/Y | 0.2585 | likely_benign | 0.244 | benign | -0.305 | Destabilizing | 0.025 | N | 0.325 | neutral | N | 0.447154634 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.