Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26155 | 78688;78689;78690 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
N2AB | 24514 | 73765;73766;73767 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
N2A | 23587 | 70984;70985;70986 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
N2B | 17090 | 51493;51494;51495 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
Novex-1 | 17215 | 51868;51869;51870 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
Novex-2 | 17282 | 52069;52070;52071 | chr2:178567669;178567668;178567667 | chr2:179432396;179432395;179432394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs778395291 | 0.129 | 0.999 | N | 0.705 | 0.356 | 0.436993770938 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/K | rs778395291 | 0.129 | 0.999 | N | 0.705 | 0.356 | 0.436993770938 | gnomAD-4.0.0 | 1.59479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43534E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3154 | likely_benign | 0.3116 | benign | -0.38 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.473708961 | None | None | N |
E/C | 0.9757 | likely_pathogenic | 0.9727 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/D | 0.6614 | likely_pathogenic | 0.6293 | pathogenic | -0.773 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.492893308 | None | None | N |
E/F | 0.9806 | likely_pathogenic | 0.9774 | pathogenic | -0.53 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/G | 0.5027 | ambiguous | 0.4769 | ambiguous | -0.627 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.495615559 | None | None | N |
E/H | 0.9357 | likely_pathogenic | 0.924 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.7591 | likely_pathogenic | 0.7519 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.4783 | ambiguous | 0.4436 | ambiguous | -0.047 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.485954321 | None | None | N |
E/L | 0.86 | likely_pathogenic | 0.8478 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/M | 0.8019 | likely_pathogenic | 0.7919 | pathogenic | 0.607 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/N | 0.7971 | likely_pathogenic | 0.7769 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/P | 0.7696 | likely_pathogenic | 0.7586 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/Q | 0.3314 | likely_benign | 0.3199 | benign | -0.191 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.476991098 | None | None | N |
E/R | 0.6917 | likely_pathogenic | 0.6586 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/S | 0.5675 | likely_pathogenic | 0.5478 | ambiguous | -0.428 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/T | 0.6284 | likely_pathogenic | 0.6108 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.5364 | ambiguous | 0.5298 | ambiguous | 0.059 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | N | 0.48861412 | None | None | N |
E/W | 0.9956 | likely_pathogenic | 0.9945 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.9733 | likely_pathogenic | 0.9692 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.