Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2616 | 8071;8072;8073 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
N2AB | 2616 | 8071;8072;8073 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
N2A | 2616 | 8071;8072;8073 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
N2B | 2570 | 7933;7934;7935 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
Novex-1 | 2570 | 7933;7934;7935 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
Novex-2 | 2570 | 7933;7934;7935 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
Novex-3 | 2616 | 8071;8072;8073 | chr2:178773118;178773117;178773116 | chr2:179637845;179637844;179637843 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.309 | N | 0.367 | 0.128 | 0.223146558224 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85731E-06 | 0 | 0 |
T/I | None | None | 0.015 | N | 0.243 | 0.211 | 0.177238962908 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
T/P | None | None | 0.939 | D | 0.403 | 0.321 | 0.361958692863 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1122 | likely_benign | 0.122 | benign | -0.463 | Destabilizing | 0.309 | N | 0.367 | neutral | N | 0.479934269 | None | None | N |
T/C | 0.4726 | ambiguous | 0.5055 | ambiguous | -0.245 | Destabilizing | 0.996 | D | 0.397 | neutral | None | None | None | None | N |
T/D | 0.4196 | ambiguous | 0.42 | ambiguous | -0.044 | Destabilizing | 0.59 | D | 0.346 | neutral | None | None | None | None | N |
T/E | 0.2543 | likely_benign | 0.2713 | benign | -0.089 | Destabilizing | 0.742 | D | 0.345 | neutral | None | None | None | None | N |
T/F | 0.1956 | likely_benign | 0.1938 | benign | -0.679 | Destabilizing | 0.91 | D | 0.482 | neutral | None | None | None | None | N |
T/G | 0.4438 | ambiguous | 0.4577 | ambiguous | -0.667 | Destabilizing | 0.59 | D | 0.397 | neutral | None | None | None | None | N |
T/H | 0.1994 | likely_benign | 0.2024 | benign | -0.951 | Destabilizing | 0.987 | D | 0.462 | neutral | None | None | None | None | N |
T/I | 0.105 | likely_benign | 0.1059 | benign | -0.032 | Destabilizing | 0.015 | N | 0.243 | neutral | N | 0.453797528 | None | None | N |
T/K | 0.1438 | likely_benign | 0.1455 | benign | -0.592 | Destabilizing | 0.742 | D | 0.355 | neutral | None | None | None | None | N |
T/L | 0.0854 | likely_benign | 0.0935 | benign | -0.032 | Destabilizing | 0.373 | N | 0.381 | neutral | None | None | None | None | N |
T/M | 0.0857 | likely_benign | 0.0929 | benign | 0.172 | Stabilizing | 0.91 | D | 0.397 | neutral | None | None | None | None | N |
T/N | 0.1428 | likely_benign | 0.1437 | benign | -0.347 | Destabilizing | 0.015 | N | 0.211 | neutral | N | 0.442501975 | None | None | N |
T/P | 0.5863 | likely_pathogenic | 0.622 | pathogenic | -0.144 | Destabilizing | 0.939 | D | 0.403 | neutral | D | 0.578824472 | None | None | N |
T/Q | 0.1814 | likely_benign | 0.1964 | benign | -0.559 | Destabilizing | 0.91 | D | 0.427 | neutral | None | None | None | None | N |
T/R | 0.1166 | likely_benign | 0.1216 | benign | -0.301 | Destabilizing | 0.91 | D | 0.405 | neutral | None | None | None | None | N |
T/S | 0.1478 | likely_benign | 0.1507 | benign | -0.574 | Destabilizing | 0.078 | N | 0.228 | neutral | N | 0.478900894 | None | None | N |
T/V | 0.1152 | likely_benign | 0.1178 | benign | -0.144 | Destabilizing | 0.009 | N | 0.222 | neutral | None | None | None | None | N |
T/W | 0.5129 | ambiguous | 0.5273 | ambiguous | -0.659 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | N |
T/Y | 0.2641 | likely_benign | 0.2685 | benign | -0.419 | Destabilizing | 0.953 | D | 0.478 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.