Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26161 | 78706;78707;78708 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
N2AB | 24520 | 73783;73784;73785 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
N2A | 23593 | 71002;71003;71004 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
N2B | 17096 | 51511;51512;51513 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
Novex-1 | 17221 | 51886;51887;51888 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
Novex-2 | 17288 | 52087;52088;52089 | chr2:178567651;178567650;178567649 | chr2:179432378;179432377;179432376 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs876658082 | None | 0.489 | N | 0.717 | 0.432 | 0.398283496042 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/L | rs876658082 | None | 0.489 | N | 0.717 | 0.432 | 0.398283496042 | gnomAD-4.0.0 | 6.57462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4705E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.998 | likely_pathogenic | 0.998 | pathogenic | -2.657 | Highly Destabilizing | 0.754 | D | 0.835 | deleterious | None | None | None | None | N |
F/C | 0.9833 | likely_pathogenic | 0.9799 | pathogenic | -1.513 | Destabilizing | 0.992 | D | 0.83 | deleterious | D | 0.567052436 | None | None | N |
F/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.679 | Highly Destabilizing | 0.993 | D | 0.844 | deleterious | None | None | None | None | N |
F/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.432 | Highly Destabilizing | 0.978 | D | 0.857 | deleterious | None | None | None | None | N |
F/G | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -3.123 | Highly Destabilizing | 0.978 | D | 0.836 | deleterious | None | None | None | None | N |
F/H | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -2.258 | Highly Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
F/I | 0.9412 | likely_pathogenic | 0.9308 | pathogenic | -1.113 | Destabilizing | 0.444 | N | 0.719 | prob.delet. | N | 0.507821239 | None | None | N |
F/K | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.291 | Highly Destabilizing | 0.978 | D | 0.857 | deleterious | None | None | None | None | N |
F/L | 0.9911 | likely_pathogenic | 0.9901 | pathogenic | -1.113 | Destabilizing | 0.489 | N | 0.717 | prob.delet. | N | 0.518140814 | None | None | N |
F/M | 0.9717 | likely_pathogenic | 0.969 | pathogenic | -0.808 | Destabilizing | 0.956 | D | 0.7 | prob.neutral | None | None | None | None | N |
F/N | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -3.046 | Highly Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -1.645 | Destabilizing | 0.993 | D | 0.872 | deleterious | None | None | None | None | N |
F/Q | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -2.817 | Highly Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
F/R | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -2.163 | Highly Destabilizing | 0.978 | D | 0.872 | deleterious | None | None | None | None | N |
F/S | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -3.433 | Highly Destabilizing | 0.942 | D | 0.836 | deleterious | D | 0.555531547 | None | None | N |
F/T | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -3.057 | Highly Destabilizing | 0.956 | D | 0.841 | deleterious | None | None | None | None | N |
F/V | 0.9508 | likely_pathogenic | 0.9418 | pathogenic | -1.645 | Destabilizing | 0.014 | N | 0.597 | neutral | N | 0.503360559 | None | None | N |
F/W | 0.9657 | likely_pathogenic | 0.9618 | pathogenic | -0.547 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/Y | 0.6317 | likely_pathogenic | 0.5973 | pathogenic | -0.955 | Destabilizing | 0.904 | D | 0.607 | neutral | N | 0.515586827 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.