Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26162 | 78709;78710;78711 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
N2AB | 24521 | 73786;73787;73788 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
N2A | 23594 | 71005;71006;71007 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
N2B | 17097 | 51514;51515;51516 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
Novex-1 | 17222 | 51889;51890;51891 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
Novex-2 | 17289 | 52090;52091;52092 | chr2:178567648;178567647;178567646 | chr2:179432375;179432374;179432373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs145185269 | -1.467 | 0.997 | N | 0.665 | 0.338 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
R/K | rs145185269 | -1.467 | 0.997 | N | 0.665 | 0.338 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/K | rs145185269 | -1.467 | 0.997 | N | 0.665 | 0.338 | None | gnomAD-4.0.0 | 5.58176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.63426E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9877 | likely_pathogenic | 0.9878 | pathogenic | -2.021 | Highly Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
R/C | 0.6557 | likely_pathogenic | 0.6104 | pathogenic | -1.94 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
R/D | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -0.942 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
R/E | 0.9791 | likely_pathogenic | 0.9773 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
R/F | 0.9876 | likely_pathogenic | 0.9865 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
R/G | 0.9845 | likely_pathogenic | 0.9855 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.550931239 | None | None | N |
R/H | 0.3129 | likely_benign | 0.2899 | benign | -2.263 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
R/I | 0.9801 | likely_pathogenic | 0.9744 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.506974048 | None | None | N |
R/K | 0.6495 | likely_pathogenic | 0.5603 | ambiguous | -1.386 | Destabilizing | 0.997 | D | 0.665 | neutral | N | 0.493033622 | None | None | N |
R/L | 0.9551 | likely_pathogenic | 0.9497 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/M | 0.9798 | likely_pathogenic | 0.974 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
R/N | 0.9905 | likely_pathogenic | 0.9898 | pathogenic | -1.264 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
R/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
R/Q | 0.5655 | likely_pathogenic | 0.4972 | ambiguous | -1.179 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
R/S | 0.9882 | likely_pathogenic | 0.9881 | pathogenic | -2.173 | Highly Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.514669823 | None | None | N |
R/T | 0.9844 | likely_pathogenic | 0.9825 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.493932221 | None | None | N |
R/V | 0.9812 | likely_pathogenic | 0.9776 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
R/W | 0.8308 | likely_pathogenic | 0.8132 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
R/Y | 0.9488 | likely_pathogenic | 0.9447 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.