Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26163 | 78712;78713;78714 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
N2AB | 24522 | 73789;73790;73791 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
N2A | 23595 | 71008;71009;71010 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
N2B | 17098 | 51517;51518;51519 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
Novex-1 | 17223 | 51892;51893;51894 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
Novex-2 | 17290 | 52093;52094;52095 | chr2:178567645;178567644;178567643 | chr2:179432372;179432371;179432370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1428745841 | -0.886 | 0.981 | D | 0.687 | 0.521 | 0.595418376915 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
V/L | rs1428745841 | -0.886 | 0.981 | D | 0.687 | 0.521 | 0.595418376915 | gnomAD-4.0.0 | 1.59481E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86538E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.846 | likely_pathogenic | 0.8656 | pathogenic | -2.593 | Highly Destabilizing | 0.998 | D | 0.714 | prob.delet. | D | 0.555771124 | None | None | N |
V/C | 0.9626 | likely_pathogenic | 0.9625 | pathogenic | -1.98 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/D | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -3.35 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.654325283 | None | None | N |
V/E | 0.9966 | likely_pathogenic | 0.9963 | pathogenic | -3.048 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/F | 0.9627 | likely_pathogenic | 0.9562 | pathogenic | -1.319 | Destabilizing | 0.999 | D | 0.851 | deleterious | D | 0.585231684 | None | None | N |
V/G | 0.9557 | likely_pathogenic | 0.9599 | pathogenic | -3.149 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.654325283 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -2.892 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.1113 | likely_benign | 0.0964 | benign | -0.958 | Destabilizing | 0.767 | D | 0.328 | neutral | D | 0.522077333 | None | None | N |
V/K | 0.9985 | likely_pathogenic | 0.9981 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/L | 0.8197 | likely_pathogenic | 0.7942 | pathogenic | -0.958 | Destabilizing | 0.981 | D | 0.687 | prob.neutral | D | 0.525710998 | None | None | N |
V/M | 0.8596 | likely_pathogenic | 0.8408 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/N | 0.9937 | likely_pathogenic | 0.9936 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9975 | likely_pathogenic | 0.9976 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/Q | 0.9968 | likely_pathogenic | 0.9965 | pathogenic | -2.235 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/R | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -2.005 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/S | 0.9646 | likely_pathogenic | 0.9675 | pathogenic | -3.059 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/T | 0.9311 | likely_pathogenic | 0.9374 | pathogenic | -2.618 | Highly Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9972 | likely_pathogenic | 0.9967 | pathogenic | -1.635 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.