Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26172 | 78739;78740;78741 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
N2AB | 24531 | 73816;73817;73818 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
N2A | 23604 | 71035;71036;71037 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
N2B | 17107 | 51544;51545;51546 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
Novex-1 | 17232 | 51919;51920;51921 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
Novex-2 | 17299 | 52120;52121;52122 | chr2:178567618;178567617;178567616 | chr2:179432345;179432344;179432343 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.239 | 0.062 | 0.167679373172 | gnomAD-4.0.0 | 1.59552E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03122E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.379 | ambiguous | 0.3169 | benign | -1.021 | Destabilizing | 0.016 | N | 0.506 | neutral | None | None | None | None | I |
I/C | 0.6561 | likely_pathogenic | 0.596 | pathogenic | -0.709 | Destabilizing | 0.676 | D | 0.638 | neutral | None | None | None | None | I |
I/D | 0.8168 | likely_pathogenic | 0.7606 | pathogenic | -0.369 | Destabilizing | 0.356 | N | 0.684 | prob.neutral | None | None | None | None | I |
I/E | 0.7181 | likely_pathogenic | 0.6627 | pathogenic | -0.448 | Destabilizing | 0.356 | N | 0.689 | prob.neutral | None | None | None | None | I |
I/F | 0.1144 | likely_benign | 0.1056 | benign | -0.97 | Destabilizing | None | N | 0.331 | neutral | None | None | None | None | I |
I/G | 0.703 | likely_pathogenic | 0.6265 | pathogenic | -1.232 | Destabilizing | 0.136 | N | 0.677 | prob.neutral | None | None | None | None | I |
I/H | 0.5597 | ambiguous | 0.5062 | ambiguous | -0.491 | Destabilizing | 0.356 | N | 0.668 | neutral | None | None | None | None | I |
I/K | 0.57 | likely_pathogenic | 0.4872 | ambiguous | -0.521 | Destabilizing | 0.295 | N | 0.685 | prob.neutral | N | 0.472214477 | None | None | I |
I/L | 0.0928 | likely_benign | 0.0821 | benign | -0.571 | Destabilizing | None | N | 0.252 | neutral | N | 0.448792217 | None | None | I |
I/M | 0.1049 | likely_benign | 0.0973 | benign | -0.422 | Destabilizing | 0.171 | N | 0.655 | neutral | N | 0.51419049 | None | None | I |
I/N | 0.3759 | ambiguous | 0.33 | benign | -0.246 | Destabilizing | 0.628 | D | 0.68 | prob.neutral | None | None | None | None | I |
I/P | 0.7714 | likely_pathogenic | 0.704 | pathogenic | -0.687 | Destabilizing | 0.628 | D | 0.681 | prob.neutral | None | None | None | None | I |
I/Q | 0.5533 | ambiguous | 0.4819 | ambiguous | -0.505 | Destabilizing | 0.628 | D | 0.667 | neutral | None | None | None | None | I |
I/R | 0.4994 | ambiguous | 0.4107 | ambiguous | 0.08 | Stabilizing | 0.295 | N | 0.68 | prob.neutral | N | 0.491505631 | None | None | I |
I/S | 0.3614 | ambiguous | 0.3179 | benign | -0.786 | Destabilizing | 0.072 | N | 0.665 | neutral | None | None | None | None | I |
I/T | 0.2892 | likely_benign | 0.248 | benign | -0.75 | Destabilizing | 0.029 | N | 0.565 | neutral | N | 0.500047757 | None | None | I |
I/V | 0.0633 | likely_benign | 0.0625 | benign | -0.687 | Destabilizing | None | N | 0.239 | neutral | N | 0.431899967 | None | None | I |
I/W | 0.7192 | likely_pathogenic | 0.6635 | pathogenic | -0.951 | Destabilizing | 0.864 | D | 0.669 | neutral | None | None | None | None | I |
I/Y | 0.4459 | ambiguous | 0.4099 | ambiguous | -0.706 | Destabilizing | 0.001 | N | 0.429 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.