Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26177 | 78754;78755;78756 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
N2AB | 24536 | 73831;73832;73833 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
N2A | 23609 | 71050;71051;71052 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
N2B | 17112 | 51559;51560;51561 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
Novex-1 | 17237 | 51934;51935;51936 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
Novex-2 | 17304 | 52135;52136;52137 | chr2:178567603;178567602;178567601 | chr2:179432330;179432329;179432328 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.682 | N | 0.675 | 0.153 | 0.177238962908 | gnomAD-4.0.0 | 1.59637E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43686E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1057 | likely_benign | 0.0967 | benign | -0.288 | Destabilizing | 0.518 | D | 0.695 | prob.delet. | N | 0.438737434 | None | None | N |
D/C | 0.4862 | ambiguous | 0.4229 | ambiguous | 0.254 | Stabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | N |
D/E | 0.0883 | likely_benign | 0.082 | benign | -0.231 | Destabilizing | 0.003 | N | 0.178 | neutral | N | 0.343304256 | None | None | N |
D/F | 0.4106 | ambiguous | 0.3376 | benign | -0.429 | Destabilizing | 0.909 | D | 0.821 | deleterious | None | None | None | None | N |
D/G | 0.1601 | likely_benign | 0.1466 | benign | -0.426 | Destabilizing | 0.813 | D | 0.643 | neutral | N | 0.49482279 | None | None | N |
D/H | 0.2204 | likely_benign | 0.195 | benign | -0.289 | Destabilizing | 0.983 | D | 0.716 | prob.delet. | N | 0.509426883 | None | None | N |
D/I | 0.1982 | likely_benign | 0.179 | benign | 0.017 | Stabilizing | 0.833 | D | 0.697 | prob.delet. | None | None | None | None | N |
D/K | 0.2303 | likely_benign | 0.2019 | benign | 0.567 | Stabilizing | 0.587 | D | 0.702 | prob.delet. | None | None | None | None | N |
D/L | 0.2293 | likely_benign | 0.204 | benign | 0.017 | Stabilizing | 0.587 | D | 0.725 | deleterious | None | None | None | None | N |
D/M | 0.4276 | ambiguous | 0.3755 | ambiguous | 0.257 | Stabilizing | 0.987 | D | 0.799 | deleterious | None | None | None | None | N |
D/N | 0.0877 | likely_benign | 0.0836 | benign | 0.332 | Stabilizing | 0.682 | D | 0.675 | prob.neutral | N | 0.447626276 | None | None | N |
D/P | 0.432 | ambiguous | 0.383 | ambiguous | -0.065 | Destabilizing | 0.953 | D | 0.716 | prob.delet. | None | None | None | None | N |
D/Q | 0.218 | likely_benign | 0.1928 | benign | 0.326 | Stabilizing | 0.833 | D | 0.623 | neutral | None | None | None | None | N |
D/R | 0.2947 | likely_benign | 0.257 | benign | 0.555 | Stabilizing | 0.909 | D | 0.802 | deleterious | None | None | None | None | N |
D/S | 0.109 | likely_benign | 0.1005 | benign | 0.26 | Stabilizing | 0.74 | D | 0.545 | neutral | None | None | None | None | N |
D/T | 0.1768 | likely_benign | 0.1615 | benign | 0.372 | Stabilizing | 0.74 | D | 0.727 | deleterious | None | None | None | None | N |
D/V | 0.119 | likely_benign | 0.1085 | benign | -0.065 | Destabilizing | 0.007 | N | 0.538 | neutral | N | 0.482856357 | None | None | N |
D/W | 0.833 | likely_pathogenic | 0.7861 | pathogenic | -0.343 | Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
D/Y | 0.1576 | likely_benign | 0.1389 | benign | -0.198 | Destabilizing | 0.938 | D | 0.819 | deleterious | N | 0.483029716 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.