Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26179 | 78760;78761;78762 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
N2AB | 24538 | 73837;73838;73839 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
N2A | 23611 | 71056;71057;71058 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
N2B | 17114 | 51565;51566;51567 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
Novex-1 | 17239 | 51940;51941;51942 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
Novex-2 | 17306 | 52141;52142;52143 | chr2:178567597;178567596;178567595 | chr2:179432324;179432323;179432322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.986 | N | 0.717 | 0.341 | 0.266843984389 | gnomAD-4.0.0 | 1.5965E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86829E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2977 | likely_benign | 0.2963 | benign | -1.022 | Destabilizing | 0.802 | D | 0.618 | neutral | N | 0.454193949 | None | None | N |
T/C | 0.717 | likely_pathogenic | 0.6937 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
T/D | 0.971 | likely_pathogenic | 0.9738 | pathogenic | -1.101 | Destabilizing | 0.989 | D | 0.721 | deleterious | None | None | None | None | N |
T/E | 0.971 | likely_pathogenic | 0.977 | pathogenic | -0.937 | Destabilizing | 0.989 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/F | 0.9518 | likely_pathogenic | 0.9561 | pathogenic | -0.676 | Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
T/G | 0.7276 | likely_pathogenic | 0.7244 | pathogenic | -1.431 | Destabilizing | 0.929 | D | 0.745 | deleterious | None | None | None | None | N |
T/H | 0.939 | likely_pathogenic | 0.9492 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
T/I | 0.8346 | likely_pathogenic | 0.8444 | pathogenic | 0.034 | Stabilizing | 0.993 | D | 0.807 | deleterious | N | 0.456458447 | None | None | N |
T/K | 0.9605 | likely_pathogenic | 0.9685 | pathogenic | -0.64 | Destabilizing | 0.989 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/L | 0.6232 | likely_pathogenic | 0.6412 | pathogenic | 0.034 | Stabilizing | 0.963 | D | 0.694 | prob.delet. | None | None | None | None | N |
T/M | 0.4708 | ambiguous | 0.4974 | ambiguous | 0.037 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/N | 0.8114 | likely_pathogenic | 0.8352 | pathogenic | -1.163 | Destabilizing | 0.986 | D | 0.717 | prob.delet. | N | 0.494329706 | None | None | N |
T/P | 0.8569 | likely_pathogenic | 0.8661 | pathogenic | -0.285 | Destabilizing | 0.993 | D | 0.796 | deleterious | N | 0.462400384 | None | None | N |
T/Q | 0.9344 | likely_pathogenic | 0.9476 | pathogenic | -0.998 | Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | N |
T/R | 0.9407 | likely_pathogenic | 0.9519 | pathogenic | -0.774 | Destabilizing | 0.989 | D | 0.792 | deleterious | None | None | None | None | N |
T/S | 0.1915 | likely_benign | 0.1826 | benign | -1.41 | Destabilizing | 0.208 | N | 0.399 | neutral | N | 0.423805267 | None | None | N |
T/V | 0.5988 | likely_pathogenic | 0.6021 | pathogenic | -0.285 | Destabilizing | 0.963 | D | 0.614 | neutral | None | None | None | None | N |
T/W | 0.9893 | likely_pathogenic | 0.9905 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
T/Y | 0.9631 | likely_pathogenic | 0.9684 | pathogenic | -0.434 | Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.